| MirGeneDB ID | Pbv-Mir-430-o36 |
|---|
| Family name |
MIR-430 (all species) |
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| Seed |
AAGUGCU |
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| Species |
Burmese python (Python bivittatus) |
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| MiRBase ID |
|
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| Paralogues |
Pbv-Mir-430-o37
Pbv-Mir-430-o38
Pbv-Mir-430-o39
|
|---|
| Orthologues |
Cmi-Mir-430-o36
|
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| Node of Origin (locus) |
P. bivittatus
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(GCA_000186305.2_Python_molurus_bivittatus) |
KE954489.1: 53193-53254 [+]
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUCUUGACCAAAAGCGGCCUCCUGAAGCCCACGCAGACAGUGGCACUUUCUUGUAGUAAUAAAUUCAAUUAAGUGCUAUAUUGUUUGUGUGGGAUUUGGGCCUGGCGGAGCAACAAGUCUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUCUUGACCAAAAGCGGCCU-- UG G --| UCUUGUAGUA
CC AA CCCACGCAGACA GUGGCACUU A
GG UU GGGUGUGUUUGU UAUCGUGAA U
UUUCUGAACAACGAGGCGGUCC GU A UA^ UUAACUUAAA
120 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Pbv-Mir-430-o36_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- ACGCAGACAGUGGCACUUUCU -21
Get sequence
|
|---|
| Mature sequence |
Pbv-Mir-430-o36_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
39- UAAGUGCUAUAUUGUUUGUGUGG -62
Get sequence
|
|---|
