MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-1247

Family name MIR-1247 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1247-v1  Cfa-Mir-1247  Cja-Mir-1247  Cpo-Mir-1247  Dno-Mir-1247  Eca-Mir-1247-v1  Ete-Mir-1247  Hsa-Mir-1247  Laf-Mir-1247  Mml-Mir-1247  Mmr-Mir-1247  Mmu-Mir-1247  Ocu-Mir-1247  Rno-Mir-1247 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 105987211-105987268 [-] UCSC Ensembl
Seed CCCGUCC
Precursor
(pre-Mir +30nt flank)		 
UCGCCCAGCGCAGCCCCGGCCGCUGGGCGCACCCGUCCCGUUCGUCCCCGGACGUUGCUCUCUACCCCGGGAACGUCGAGACUGGAGCGCCCGAACUGAGCCACCUUCGCGGACCCCG
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Structure
        10        20          30        40        50         
UCGCCCAGCGCAGCCCCGGCCGC--|      A  C   C  UU   C     ACGUUGC 
                         UGGGCGC CC GUC CG  CGU CCCGG       \
                         GCCCGCG GG CAG GC  GCA GGGCC       U
GCCCCAGGCGCUUCCACCGAGUCAA^      A  U   A  U-   A     CCAUCUC 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-1247_5p (predicted)
mirBase accessionNone
Sequence 
0- ACCCGUCCCGUUCGUCCCCGGA -22
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Star sequence

Pab-Mir-1247_3p* (predicted)
mirBase accessionNone
Sequence 
37- CGGGAACGUCGAGACUGGAGC -58
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