MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-208-P2

Family name MIR-208 (all species)
Seed UAAGACG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-208a
Paralogues Ocu-Mir-208-P1 
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cfa-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b  Xtr-Mir-208-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chr17: 43584310-43584366 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P2)		 Mir-208-P2 chr17: 43584310-43584366 [-] UCSC Ensembl
Mir-208-P1 chr17: 43610547-43610603 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGGCCCUGACCCACUUCCUGUGACAGGCGAGCUUUUAGCCCGGGUUAUACCUGAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACCGUCGAUGAGCCUG
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Structure
        10          20        30        40        50        
GCUGGCCCUGACCCACU--|   G    AG          A  C  GG      CUGAU 
                   UCCU UGAC  GCGAGCUUUU GC CG  UUAUAC     \
                   AGGA ACUG  UGUUCGAAAA CG GC  AAUAUG     G
GUCCGAGUAGCUGCCAUCG^   G    GU          A  A  AG      CACUC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-208-P2_5p* (predicted)
mirBase accessionMIMAT0048329
Sequence 
0- GAGCUUUUAGCCCGGGUUAUAC -22
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Mature sequence

Ocu-Mir-208-P2_3p
mirBase accessionMIMAT0048330
Sequence 
35- AUAAGACGAGCAAAAAGCUUGU -57
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