MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-186

Family name MIR-186 (all species)
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-186
Paralogues
Orthologues Bta-Mir-186  Cfa-Mir-186  Cja-Mir-186  Cpo-Mir-186  Dno-Mir-186  Eca-Mir-186  Ete-Mir-186  Hsa-Mir-186  Laf-Mir-186  Mdo-Mir-186  Mml-Mir-186  Mmr-Mir-186  Mmu-Mir-186  Neu-Mir-186  Ocu-Mir-186  Pab-Mir-186  Rno-Mir-186  Sha-Mir-186 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041731.1: 116682503-116682563 [+]
Seed AAAGAAU
Precursor
(pre-Mir +30nt flank)
CCCCUGUUUUUUUGCUUGCUCAUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUAUGCUUGGUCACAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUGAAUUGCGUCAGCCAUACU
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Structure
        10           20        30        40        50        60
CCCCUGUUUUUUUGCUU---|    U                 U     U     UUCUAUG 
                    GCUCA AACUUUCCAAAGAAUUC CCUUU GGGCU       C
                    CGAGU UUGAAGGGUUUUUUAAG GGAAA CCCGA       U
UCAUACCGACUGCGUUAAGU^    -                 U     -     CACUGGU 
 .       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Oan-Mir-186_5p

mirBase accessionMIMAT0006931
Sequence
0- CAAAGAAUUCUCCUUUUGGGCU -22
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Star sequence

Oan-Mir-186_3p*

mirBase accessionMIMAT0006932
Sequence
40- CCCAAAGGUGAAUUUUUUGGG -61
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