MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-186

Family name MIR-186 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-186
Paralogues
Orthologues Cfa-Mir-186  Cja-Mir-186  Cpo-Mir-186  Dno-Mir-186  Eca-Mir-186  Ete-Mir-186  Hsa-Mir-186  Laf-Mir-186  Mdo-Mir-186  Mml-Mir-186  Mmr-Mir-186  Mmu-Mir-186  Neu-Mir-186  Oan-Mir-186  Ocu-Mir-186  Pab-Mir-186  Rno-Mir-186  Sha-Mir-186 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037330.1: 74160348-74160408 [+] UCSC Ensembl
Seed AAAGAAU
Precursor
(pre-Mir +30nt flank)
UCAAACAUUUUUUCAUUGCUUAUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGAUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUAAAUUACUUCAACCAAAAU
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Structure
        10           20        30        40        50        60
UCAAACAUUUUUUCAUU---|    U                 U     U      UCUGAU 
                    GCUUA AACUUUCCAAAGAAUUC CCUUU GGGCUU      U
                    CGAGU UUGAAGGGUUUUUUAAG GGAAA CCCGAA      U
UAAAACCAACUUCAUUAAAU^    -                 U     -      UUUUAU 
 .       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-186_5p

mirBase accessionMIMAT0003818
Sequence
0- CAAAGAAUUCUCCUUUUGGGCUU -23
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Proposed targets TargetScanVert: bta-miR-186
Star sequence

Bta-Mir-186_3p*

mirBase accessionNone
Sequence
39- GCCCAAAGGUGAAUUUUUUGGG -61
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