MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-7398-P21a

Family name MIR-7398 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7398-o7a  Neu-Mir-7398-o7b  Neu-Mir-7398-o7c  Neu-Mir-7398-o13  Neu-Mir-7398-o14  Neu-Mir-7398-P5  Neu-Mir-7398-P9f  Neu-Mir-7398-P9g  Neu-Mir-7398-P21b  Neu-Mir-7398-P23  Neu-Mir-7398-P24  Neu-Mir-7398-P26 
Orthologues Mdo-Mir-7398-P21  Sha-Mir-7398-P21 
Node of Origin (locus) N. eugenii
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 76345814-76345868 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7398-P21a)		 Mir-7398-P5 CM051820.1: 76331935-76331995 [+] UCSC Ensembl
Mir-7398-P9g CM051820.1: 76333901-76333959 [+] UCSC Ensembl
Mir-7398-P9f CM051820.1: 76334563-76334621 [+] UCSC Ensembl
Mir-7398-o7a CM051820.1: 76338802-76338860 [+] UCSC Ensembl
Mir-7398-o7b CM051820.1: 76339936-76339994 [+] UCSC Ensembl
Mir-7398-o7c CM051820.1: 76340242-76340300 [+] UCSC Ensembl
Mir-7398-P21a CM051820.1: 76345814-76345868 [+] UCSC Ensembl
Mir-7398-P23 CM051820.1: 76354266-76354324 [+] UCSC Ensembl
Mir-7398-P24 CM051820.1: 76358199-76358257 [+] UCSC Ensembl
Mir-7398-o13 CM051820.1: 76359288-76359344 [+] UCSC Ensembl
Mir-7398-o14 CM051820.1: 76361111-76361170 [+] UCSC Ensembl
Mir-7398-P26 CM051820.1: 76361577-76361636 [+] UCSC Ensembl
Mir-7398-P21b CM051820.1: 76365212-76365266 [+] UCSC Ensembl
Seed AAUUCAC
Precursor
(pre-Mir +30nt flank)		 
CAGGCACUUUCUCCUCCAGGUGUCUGGCAGUGUAGAGAGUGGUGAGCAUGCUGUGCUGUAUCAGGUAAUUCACCCUUCUCUCACUAACUGGCACCUUGGGCUCUUCUUCAACCCC
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Structure
        10          20        30        40        50        
CAGGCACUUUCUCCUCC--|      UGGC    U      U      CA    GUGCU 
                   AGGUGUC    AGUG AGAGAG GGUGAG  UGCU     \
                   UCCACGG    UCAC UCUCUU CCACUU  AUGG     G
CCCCAACUUCUUCUCGGGU^      UCAA    -      C      A-    ACUAU 
   110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-7398-P21a_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGUAGAGAGUGGUGAGCAUGCU -22
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Mature sequence

Neu-Mir-7398-P21a_3p
mirBase accessionNone
Sequence 
35- UAAUUCACCCUUCUCUCACU -55
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