MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-670

Family name MIR-670 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-670
Paralogues
Orthologues Bta-Mir-670  Cja-Mir-670  Cpo-Mir-670  Dno-Mir-670  Eca-Mir-670  Hsa-Mir-670  Laf-Mir-670  Mml-Mir-670  Mmr-Mir-670  Ocu-Mir-670  Pab-Mir-670  Rno-Mir-670 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr2: 94261316-94261379 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-670)
Mir-129-P1 chr2: 94241376-94241439 [-] UCSC Ensembl
Mir-670 chr2: 94261316-94261379 [-] UCSC Ensembl
Seed UUCCUCA
Precursor
(pre-Mir +30nt flank)
UGCUACACGUGGUUUGGAGGUGGGCCUGACAUCCCUGAGUGUAUGUGGUGAACCUGAACUUGCCCUGGGUUUCCUCAUAUCCAUUCAGGAGUGUCAGCUGCCUCUUCGCUCAACGCUCGCUGGA
Get precursor sequence
Structure
        10            20        30        40         50        60 
UGCUACACGUGGUUUGG----|  UG GC      UC        U     - UG    UGAACU 
                     AGG  G  CUGACA  CCUGAGUG AUGUG G  AACC      \
                     UCC  C  GACUGU  GGACUUAC UAUAC C  UUGG      U
AGGUCGCUCGCAACUCGCUUC^  GU --      GA        C     U CU    GUCCCG 
  120       110       100          90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-670_5p*

mirBase accessionMIMAT0003736
Sequence
0- AUCCCUGAGUGUAUGUGGUGAACC -24
Get sequence
Proposed targets microrna.org: MIMAT0003736
TargetScanVert: mmu-miR-670-5p
miRDB: MIMAT0003736
Mature sequence

Mmu-Mir-670_3p

mirBase accessionMIMAT0017242
Sequence
39- UUUCCUCAUAUCCAUUCAGGAGUGU -64
Get sequence
Proposed targets TargetScanVert: mmu-miR-670-3p
miRDB: MIMAT0017242