MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-154-P6a

Family name MIR-154 (all species)
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-154-P1  Mmr-Mir-154-P2-v1  Mmr-Mir-154-P3-v1  Mmr-Mir-154-P5  Mmr-Mir-154-P6b  Mmr-Mir-154-P6c  Mmr-Mir-154-P7  Mmr-Mir-154-P8a  Mmr-Mir-154-P8b  Mmr-Mir-154-P9  Mmr-Mir-154-P10  Mmr-Mir-154-P11  Mmr-Mir-154-P12  Mmr-Mir-154-P14  Mmr-Mir-154-P16  Mmr-Mir-154-P17  Mmr-Mir-154-P18  Mmr-Mir-154-P20  Mmr-Mir-154-P21  Mmr-Mir-154-P22  Mmr-Mir-154-P23  Mmr-Mir-154-P24  Mmr-Mir-154-P25  Mmr-Mir-154-P26  Mmr-Mir-154-P28  Mmr-Mir-154-P29  Mmr-Mir-154-P30  Mmr-Mir-154-P31  Mmr-Mir-154-P32  Mmr-Mir-154-P33  Mmr-Mir-154-P34  Mmr-Mir-154-P37 
Orthologues Bta-Mir-154-P6a-v1  Cfa-Mir-154-P6a-v1  Cja-Mir-154-P6a  Cpo-Mir-154-P6a-v1  Dno-Mir-154-P6a-v1  Eca-Mir-154-P6a-v1  Ete-Mir-154-P6a-v1  Hsa-Mir-154-P6a-v1  Laf-Mir-154-P6a  Mml-Mir-154-P6a-v1  Mmu-Mir-154-P6a-v1  Ocu-Mir-154-P6a-v1  Pab-Mir-154-P6a-v1  Rno-Mir-154-P6a-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007663.1: 12721925-12721980 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P6a-v1)		 Mir-154-P1 CM007663.1: 12718303-12718361 [+] UCSC Ensembl
Mir-154-P2-v2 CM007663.1: 12719569-12719626 [+] UCSC Ensembl
Mir-154-P2-v1 CM007663.1: 12719570-12719625 [+] UCSC Ensembl
Mir-154-P3-v1 CM007663.1: 12720026-12720080 [+] UCSC Ensembl
Mir-154-P3-v2 CM007663.1: 12720027-12720079 [+] UCSC Ensembl
Mir-154-P37 CM007663.1: 12721366-12721423 [+] UCSC Ensembl
Mir-154-P5 CM007663.1: 12721763-12721818 [+] UCSC Ensembl
Mir-154-P6a-v1 CM007663.1: 12721925-12721980 [+] UCSC Ensembl
Mir-154-P6a-v2 CM007663.1: 12721925-12721980 [+] UCSC Ensembl
Mir-154-P7 CM007663.1: 12722219-12722276 [+] UCSC Ensembl
Mir-154-P8a CM007663.1: 12722967-12723025 [+] UCSC Ensembl
Mir-154-P8b CM007663.1: 12723284-12723341 [+] UCSC Ensembl
Mir-154-P9 CM007663.1: 12725475-12725530 [+] UCSC Ensembl
Mir-154-P10 CM007663.1: 12725895-12725951 [+] UCSC Ensembl
Mir-154-P11 CM007663.1: 12727838-12727894 [+] UCSC Ensembl
Mir-154-P12 CM007663.1: 12729563-12729620 [+] UCSC Ensembl
Mir-376-P1 CM007663.1: 12733939-12733996 [+] UCSC Ensembl
Mir-376-P2 CM007663.1: 12734266-12734323 [+] UCSC Ensembl
Mir-376-P3 CM007663.1: 12734651-12734708 [+] UCSC Ensembl
Mir-154-P14 CM007663.1: 12734778-12734832 [+] UCSC Ensembl
Mir-376-P4 CM007663.1: 12735002-12735059 [+] UCSC Ensembl
Mir-376-P5 CM007663.1: 12735323-12735380 [+] UCSC Ensembl
Mir-154-P16 CM007663.1: 12737194-12737253 [+] UCSC Ensembl
Novel-1 CM007663.1: 12738931-12738989 [+] UCSC Ensembl
Mir-154-P17 CM007663.1: 12739835-12739897 [+] UCSC Ensembl
Mir-154-P18 CM007663.1: 12740364-12740421 [+] UCSC Ensembl
Mir-154-P20 CM007663.1: 12741825-12741884 [+] UCSC Ensembl
Mir-544 CM007663.1: 12742576-12742632 [+] UCSC Ensembl
Mir-154-P21 CM007663.1: 12743455-12743514 [+] UCSC Ensembl
Mir-154-P22 CM007663.1: 12745610-12745663 [+] UCSC Ensembl
Mir-154-P23 CM007663.1: 12746050-12746107 [+] UCSC Ensembl
Mir-154-P24 CM007663.1: 12748064-12748121 [+] UCSC Ensembl
Mir-134 CM007663.1: 12748440-12748499 [+] UCSC Ensembl
Mir-154-P25 CM007663.1: 12749203-12749261 [+] UCSC Ensembl
Mir-154-P6b CM007663.1: 12750026-12750082 [+] UCSC Ensembl
Mir-154-P26 CM007663.1: 12753864-12753921 [+] UCSC Ensembl
Mir-154-P28 CM007663.1: 12755051-12755104 [+] UCSC Ensembl
Mir-154-P29 CM007663.1: 12756506-12756565 [+] UCSC Ensembl
Mir-541 CM007663.1: 12758520-12758585 [+] UCSC Ensembl
Mir-154-P30 CM007663.1: 12759249-12759302 [+] UCSC Ensembl
Mir-154-P31 CM007663.1: 12759397-12759451 [+] UCSC Ensembl
Mir-154-P32 CM007663.1: 12759536-12759591 [+] UCSC Ensembl
Mir-154-P33 CM007663.1: 12759838-12759893 [+] UCSC Ensembl
Mir-154-P6c CM007663.1: 12760342-12760397 [+] UCSC Ensembl
Mir-154-P34 CM007663.1: 12760563-12760618 [+] UCSC Ensembl
Variant

Mmr-Mir-154-P6a-v1
Seed ACAUUAC
Precursor
(pre-Mir +30nt flank)		 
CAGCGCCUCUGCUGCUUGGUACUUGGAGAGAGGUGGUCCGUGGCGCGUUCGCUUUAUUUAUGGCGCACAUUACACGGUCGACCUCUCUGCGGUAUCUAAUCCCGCCUUGCAAGCUU
Get precursor sequence
Structure
        10           20        30         40              50    
CAGCGCCUCUGCUGCUU---     U  G        -  U     ------|   GUUCGCU 
                    GGUAC UG AGAGAGGU GG CCGUG      GCGC       U
                    CUAUG GC UCUCUCCA CU GGCAC      CGCG       U
UUCGAACGUUCCGCCCUAAU     -  G        G  -     AUUACA^   GUAUUUA 
    110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-154-P6a-v1_5p*
mirBase accessionNone
Sequence 
0- AGGUGGUCCGUGGCGCGUUCG -21
Get sequence
Mature sequence

Mmr-Mir-154-P6a-v1_3p
mirBase accessionNone
Sequence 
35- CACAUUACACGGUCGACCUCU -56
Get sequence
Variant

Mmr-Mir-154-P6a-v2
Seed CACAUUA
Precursor
(pre-Mir +30nt flank)		 
CAGCGCCUCUGCUGCUUGGUACUUGGAGAGAGGUGGUCCGUGGCGCGUUCGCUUUAUUUAUGGCGCACAUUACACGGUCGACCUCUCUGCGGUAUCUAAUCCCGCCUUGCAAGCUU
Get precursor sequence
Structure
        10           20        30         40        50       
CAGCGCCUCUGCUGCUU---|     U G        -  U     GCGC  U   UUUA 
                    GGUACU G AGAGAGGU GG CCGUG    GU CGC    U
                    CUAUGG C UCUCUCCA CU GGCAC    CA GCG    U
UUCGAACGUUCCGCCCUAAU^     - G        G  -     AUUA  C   GUAU 
    110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-154-P6a-v2_5p*
mirBase accessionNone
Sequence 
0- AGGUGGUCCGUGGCGCGUUCGC -22
Get sequence
Mature sequence

Mmr-Mir-154-P6a-v2_3p
mirBase accessionNone
Sequence 
34- GCACAUUACACGGUCGACCUCU -56
Get sequence