MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-628

Family name MIR-628 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-628
Paralogues
Orthologues Bta-Mir-628  Cfa-Mir-628  Cja-Mir-628  Dno-Mir-628  Eca-Mir-628  Ete-Mir-628  Hsa-Mir-628  Laf-Mir-628  Mmr-Mir-628  Ocu-Mir-628  Pab-Mir-628 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014342.1: 31795692-31795752 [-] UCSC Ensembl
Seed UGCUGAC
Precursor
(pre-Mir +30nt flank)
UAUCGGAGAUAGCUGUUGUGUCACUUCCUCAUGCUGACAUAUUUACUAGAGGGUAAAAUUAAUAACCUUCUAGUAAGAGUGGCAGUCGAAGGGAAGGACUCAUCUGACUUCUGGAAACCUA
Get precursor sequence
Structure
        10           20        30         40        50         
UAUCGGAGAUAGCUGUU---|U   A      CA  -   A   A           GUAAAA 
                    G GUC CUUCCU  UG CUG CAU UUUACUAGAGG      U
                    C CAG GAAGGG  GC GAC GUG GAAUGAUCUUC      U
AUCCAAAGGUCUUCAGUCUA^U   -      AA  U   G   A           CAAUAA 
 .       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-628_5p

mirBase accessionMIMAT0006474
Sequence
0- AUGCUGACAUAUUUACUAGAGG -22
Get sequence
Proposed targets TargetScanVert: mml-miR-628-5p
Star sequence

Mml-Mir-628_3p*

mirBase accessionMIMAT0006475
Sequence
38- UCUAGUAAGAGUGGCAGUCGAAG -61
Get sequence
Proposed targets TargetScanVert: mml-miR-628-3p