MirGeneDB ID | Mml-Mir-590 |
Family name |
MIR-590 (all species) |
Seed |
AAUUUUA |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-590
|
Paralogues |
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Orthologues |
Bta-Mir-590
Cfa-Mir-590
Dno-Mir-590
Hsa-Mir-590
Oan-Mir-590
Ocu-Mir-590
|
Node of Origin (locus) |
Mammalia
|
Node of Origin (family) |
Mammalia
|
Genome context (rheMac8_trace) |
chr3: 43211731-43211792 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GUUCUUAAAAGUCUGUAGCCAGUCAGAAAUGAGCUUAUUCAUAAAAGUGCAGUAUGGUGGAGUCAGUCUGUAAUUUUAUGUAUAAGCUGGUCUCUAACUGAAACGUGCAGCAGCUGUCUUCU
Get precursor sequence
|
Structure | 10 20 30 40 50
GUUCUUAAAAGUCUGUAGC---| C A G U G UAUGGUG
CAGU AGA AU AGCUUAU CAUAAAA UGCAG \
GUCA UCU UG UCGAAUA GUAUUUU AUGUC G
UCUUCUGUCGACGACGUGCAAA^ A C G U A UGACUGA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-590_5p* |
mirBase accession | MIMAT0006450 |
Sequence |
0- GAGCUUAUUCAUAAAAGUGCAG -22
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-590-5p
|
Mature sequence |
Mml-Mir-590_3p |
mirBase accession | MIMAT0006451 |
Sequence |
40- UAAUUUUAUGUAUAAGCUGGUC -62
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-590-3p
|