| MirGeneDB ID | Mml-Mir-590 |
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| Family name |
MIR-590 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-590
|
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| Paralogues |
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| Orthologues |
Bta-Mir-590
Cfa-Mir-590
Dno-Mir-590
Eca-Mir-590
Hsa-Mir-590
Mmr-Mir-590
Oan-Mir-590
Ocu-Mir-590
Pab-Mir-590
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| Node of Origin (locus) |
Mammalia
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| Node of Origin (family) |
Mammalia
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014338.1: 46557059-46557120 [+]
UCSC
Ensembl
|
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| Seed |
AAUUUUA |
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Precursor
(pre-Mir +30nt flank) |
GUUCUUAAAAGUCUGUAGCCAGUCAGAAAUGAGCUUAUUCAUAAAAGUGCAGUAUGGUGGAGUCAGUCUGUAAUUUUAUGUAUAAGCUGGUCUCUAACUGAAACGUGCAGCAGCUGUCUUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUUCUUAAAAGUCUGUAGC---| C A G U G UAUGGUG
CAGU AGA AU AGCUUAU CAUAAAA UGCAG \
GUCA UCU UG UCGAAUA GUAUUUU AUGUC G
UCUUCUGUCGACGACGUGCAAA^ A C G U A UGACUGA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-590_5p* |
| mirBase accession | MIMAT0006450 |
|---|
| Sequence |
0- GAGCUUAUUCAUAAAAGUGCAG -22
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-590-5p
|
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| Mature sequence |
Mml-Mir-590_3p |
| mirBase accession | MIMAT0006451 |
|---|
| Sequence |
40- UAAUUUUAUGUAUAAGCUGGUC -62
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-590-3p
|
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