MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-590

Family name MIR-590 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-590
Paralogues
Orthologues Bta-Mir-590  Dno-Mir-590  Eca-Mir-590  Hsa-Mir-590  Mml-Mir-590  Mmr-Mir-590  Oan-Mir-590  Ocu-Mir-590  Pab-Mir-590 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(canFam3_add)		 chr6: 6186538-6186598 [-] UCSC Ensembl
Seed AAUUUUA
Precursor
(pre-Mir +30nt flank)		 
AUCCUAAAAGUCCUCUAGCCAAUCAGAAAUGAGCUUAUUCAUAAAAGUACAGUAUGAUCCAGUAAACCUGUAAUUUUAUGUAUAAGCUAGUCUCUGAUUGAAACAUGCAACAAAUGUCUUC
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Structure
        10          20        30        40        50          
AUCCUAAAAGUCCUCUAGC--|       A  G       U       G     UAUGAUC 
                     CAAUCAGA AU AGCUUAU CAUAAAA UACAG       \
                     GUUAGUCU UG UCGAAUA GUAUUUU AUGUC       C
CUUCUGUAAACAACGUACAAA^       C  A       U       A     CAAAUGA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-590_5p*
mirBase accessionNone
Sequence 
0- GAGCUUAUUCAUAAAAGUACAG -22
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Mature sequence

Cfa-Mir-590_3p
mirBase accessionMIMAT0006700
Sequence 
40- UAAUUUUAUGUAUAAGCUAGU -61
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Proposed targets TargetScanVert: cfa-miR-590
miRDB: MIMAT0006700