MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-728-P2

Family name MIR-728 (all species)
Seed UACUAAG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Gmo-Mir-728-P2  Loc-Mir-728  Tni-Mir-728-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Neopterygii
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV885007.1: 631676-631737 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCAGAAUCAUAUUUUGCACCUCAUGAGAAAAUGUAGUAGACUAUAAGUAUACAUAAAACUCAGAAAGUAUACUAAGUAUACUACGUUUACUCAAGAGAGGCAUCUUCAGAGUUCCCAUUA
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Structure
        10          20        30        40        50        60 
GUGCAGAAUCAUAUUUU--| AC   A    A          G   AUA       AUAAAA 
                   GC  CUC UGAG AAAUGUAGUA ACU   AGUAUAC      C
                   CG  GAG ACUC UUUGCAUCAU UGA   UCAUAUG      U
AUUACCCUUGAGACUUCUA^ GA   A    A          A   A--       AAAGAC 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-728-P2_5p*

mirBase accessionNone
Sequence
0- AAAUGUAGUAGACUAUAAGUAUAC -24
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Mature sequence

Mal-Mir-728-P2_3p

mirBase accessionNone
Sequence
40- AUACUAAGUAUACUACGUUUAC -62
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