MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-281-P11

Family name MIR-281 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-281-P10 
Orthologues Aae-Mir-281  Aga-Mir-281  Agr-Mir-281  Asu-Mir-281  Bfl-Mir-281  Bge-Mir-281  Bko-Mir-281  Bla-Mir-281  Bpl-Mir-281  Cin-Mir-281  Csc-Mir-281  Cte-Mir-281  Dgr-Mir-281  Dlo-Mir-281  Dma-Mir-281  Dpu-Mir-281  Eba-Mir-281  Ebu-Mir-281  Egr-Mir-281  Esc-Mir-281  Gsa-Mir-281  Hme-Mir-281  Hru-Mir-281  Isc-Mir-281  Lhy-Mir-281  Llo-Mir-281  Mgi-Mir-281  Mom-Mir-281  Npo-Mir-281  Obi-Mir-281  Ofu-Mir-281  Ovu-Mir-281  Pca-Mir-281  Pcr-Mir-281  Pdu-Mir-281  Pfl-Mir-281  Rph-Mir-281  Sko-Mir-281  Sma-Mir-281  Sme-Mir-281  Snu-Mir-281  Sto-Mir-281  Tca-Mir-281  Tur-Mir-281  War-Mir-281 
Node of Origin (locus) L. anatina
Node of Origin (family) Nephrozoa
Genome context
(LinAna_1.0)		 LFEI01000142: 432861-432917 [-] Ensembl
Seed AGAGAGC
Precursor
(pre-Mir +30nt flank)		 
CAGGGUCAUCUUGACCCAAGUCCGGCGAUGAAGAGAGCAUUCUUGGACAGUGUAUAAUAGCCAACUGUCAUGGAGUUGCUCUCUUUACCGACUGUGGCUAAUGACGUCACGCCAAAU
Get precursor sequence
Structure
        10        20          30         40        50       
CAGGGUCAUCUUGACCCA    -   -  A          -|    UG      GUAUA 
                  AGUC CGG CG UGAAGAGAGC AUUCU  GACAGU     A
                  UCGG GUC GC AUUUCUCUCG UGAGG  CUGUCA     U
UAAACCGCACUGCAGUAA    U   A  C          U^    UA      ACCGA 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Mature sequence

Lan-Mir-281-P11_5p
mirBase accessionNone
Sequence 
0- AAGAGAGCAUUCUUGGACAGU -21
Get sequence
Co-mature sequence

Lan-Mir-281-P11_3p
mirBase accessionNone
Sequence 
35- UGUCAUGGAGUUGCUCUCUUUA -57
Get sequence