MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1677-P4

Family name MIR-1677 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1784
Paralogues Gga-Mir-1677-P1  Gga-Mir-1677-P2  Gga-Mir-1677-P3  Gga-Mir-1677-P5  Gga-Mir-1677-P6 
Orthologues Ami-Mir-1677-o4  Cli-Mir-1677-P4  Cpi-Mir-1677-P4  Tgu-Mir-1677-P4 
Node of Origin (locus) Archelosauria
Node of Origin (family) Diapsida
Genome context
(Gallus_gallus.GRCg6a)		 3: 35727117-35727174 [+] UCSC Ensembl
Seed UGACUUA
Precursor
(pre-Mir +30nt flank)		 
UGCAAUGUGGACCAAUUUCUUGGGGCCCAAUUCUGCUCUUAUUGAAAUCAGUGAGAGUUCUGCCAUUGACUUAAAUAGGAGCAGAAUUGGGACCUAAGAAGAGAUUUCCAGUUCAGGG
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Structure
        10          20        30        40        50        
UGCAAUGUGGACCAAUU--|      G                  G  A      AGAG 
                   UCUUGGG CCCAAUUCUGCUCUUAUU AA UCAGUG    U
                   AGAAUCC GGGUUAAGACGAGGAUAA UU AGUUAC    U
GGGACUUGACCUUUAGAGA^      A                  A  C      CGUC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1677-P4_5p*
mirBase accessionMIMAT0007696
Sequence 
0- UUCUGCUCUUAUUGAAAUCAGUG -23
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Proposed targets TargetScanVert: gga-miR-1784-5p
miRDB: MIMAT0007696
Mature sequence

Gga-Mir-1677-P4_3p
mirBase accessionNone
Sequence 
35- UUGACUUAAAUAGGAGCAGAAUU -58
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