MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-1997-P3

Family name MIR-1997 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-1997-P1  Efe-Mir-1997-P2  Efe-Mir-1997-P4  Efe-Mir-1997-P5 
Orthologues Cte-Mir-1997  Dgr-Mir-1997  Pdu-Mir-1997  Snu-Mir-1997 
Node of Origin (locus) E. fetida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(Efe_combined)		 Efet.01.3296: 9001-9065 [-]
Seed CUGCAGG
Precursor
(pre-Mir +30nt flank)		 
UCUUCAAAGGAAUAGAGCGACCAGAUCGCUGGGUUGAUGGUUUCUGUAAAGUAAAUGCGUCUGAAAUGGAACUCUGCAGGUUCACAUCAGCCCUGCGACUGGUGUGCCGACACCUGGCGAGUACG
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Structure
        10           20        30        40         50        60 
UCUUCAAAGGAAUAGAGCG---|    A    U         GUU-      A   AAAUGCGU 
                      ACCAG UCGC GGGUUGAUG    UCUGUA AGU        C
                      UGGUC AGCG CCCGACUAC    GGACGU UCA        U
GCAUGAGCGGUCCACAGCCGUG^    -    U         ACUU      C   AGGUAAAG 
   120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Efe-Mir-1997-P3_5p*
mirBase accessionNone
Sequence 
0- GGGUUGAUGGUUUCUGUAAAGU -22
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Mature sequence

Efe-Mir-1997-P3_3p
mirBase accessionNone
Sequence 
42- UCUGCAGGUUCACAUCAGCCCUG -65
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