MirGeneDB 2.1
MirGeneDB ID

Cte-Mir-1997

Family name MIR-1997 (all species)
Seed CUGCAGG
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-1997
Paralogues
Orthologues Efe-Mir-1997-P1  Efe-Mir-1997-P2  Efe-Mir-1997-P3  Efe-Mir-1997-P4  Efe-Mir-1997-P5 
Node of Origin (locus) Annelida
Node of Origin (family) Annelida
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_20: 24859-24919 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUGCCCUUGUCGUCAUGCGCGGCUCCGUUGGGUUGGUGGGACCUCCAGCGUCAGUUGACCAGAACUCUGCAGGUUCACAUCAGCCCCAUGGGGUCGCUGCCUUUUCAUCACCAUGGCGA
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Structure
        10         20         30        40         50         
UGCUGCCCUUGUCGUCAU-  -          U         -|     C   C  CAGUU 
                   GC GCGGCUCCGU GGGUUGGUG GGACCU CAG GU     G
                   CG CGCUGGGGUA CCCGACUAC CUUGGA GUC CA     A
AGCGGUACCACUACUUUUC  U          C         A^     C   U  AGACC 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cte-Mir-1997_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGGGUUGGUGGGACCUCCAGCGU -23
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Mature sequence

Cte-Mir-1997_3p
mirBase accessionMIMAT0009708
Sequence 
37- UCUGCAGGUUCACAUCAGCCCCAU -61
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