MirGeneDB 2.1
MirGeneDB ID

Ebu-Mir-17-P3f-v2

Family name MIR-17 (all species)
Seed AAGUGCA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-17-P1e  Ebu-Mir-17-P2e  Ebu-Mir-17-P3e  Ebu-Mir-17-P3f-v1  Ebu-Mir-17-P4e 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010282.1: 2016433-2016489 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAGUCGUACCACAUCGAGGACCAGGGGAAAAGUGCAAACAGUGAUAGGUGCUGCUUUAAUGUUACCUUCUCUGUUUGCACUUACCUUCUUGUCUUCCACGAUCUGCGAUUUAUGU
Get precursor sequence
Structure
        10          20        30        40        50        
UGGAGUCGUACCACAUC--|     C     AA            U  U    GCUGCU 
                   GAGGAC AGGGG  AAGUGCAAACAG GA AGGU      U
                   CUUCUG UCUUC  UUCACGUUUGUC CU UCCA      U
UGUAUUUAGCGUCUAGCAC^     U     CA            U  -    UUGUAA 
     110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-17-P3f-v2_5p
mirBase accessionNone
Sequence 
0- AAAGUGCAAACAGUGAUAGGU -21
Get sequence
Star sequence

Ebu-Mir-17-P3f-v2_3p*
mirBase accessionNone
Sequence 
37- CUUCUCUGUUUGCACUUACC -57
Get sequence