MirGeneDB 2.1
MirGeneDB ID

Ebu-Mir-1-P8

Family name MIR-1 (all species)
Seed GGAAUGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-1-P5  Ebu-Mir-1-P6a  Ebu-Mir-1-P6b  Ebu-Mir-1-P7 
Orthologues Aae-Mir-1  Asu-Mir-1  Bfl-Mir-1  Bge-Mir-1  Bla-Mir-1  Cbr-Mir-1  Cel-Mir-1  Cgi-Mir-1  Cin-Mir-1  Cte-Mir-1  Dan-Mir-1  Dma-Mir-1  Dme-Mir-1  Dmo-Mir-1  Dpu-Mir-1  Dsi-Mir-1  Dya-Mir-1  Esc-Mir-1  Hme-Mir-1  Isc-Mir-1  Lan-Mir-1  Lgi-Mir-1  Obi-Mir-1  Ovu-Mir-1  Pfl-Mir-1  Pmi-Mir-1  Sko-Mir-1  Spu-Mir-1  Tca-Mir-1  Xbo-Mir-1 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02009839.1: 5508863-5508923 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCAGUUCGACGAGCAGCUUGCGUACACGGACAUGCUUCUUUACCUGGCCAUACGGAUACCUUCGGCUAUGGAAUGUAAAGAAGUAUGUUCGUUUGCAUAAACCAUCCACCAGACCUUGUA
Get precursor sequence
Structure
        10        20          30        40        50        60
GUCAGUUCGACGAGCAGCUUGC--|  C                  CUGG     CGGAUA 
                        GUA ACGGACAUGCUUCUUUAC    CCAUA      C
                        CGU UGCUUGUAUGAAGAAAUG    GGUAU      C
AUGUUCCAGACCACCUACCAAAUA^  U                  UAA-     CGGCUU 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ebu-Mir-1-P8_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACAUGCUUCUUUACCUGGCCAUA -23
Get sequence
Mature sequence

Ebu-Mir-1-P8_3p
mirBase accessionNone
Sequence 
39- UGGAAUGUAAAGAAGUAUGUUC -61
Get sequence