MirGeneDB 3.0

MirGeneDB ID

Dya-Mir-9690

Family name MIR-9690 (all species)
Species Fruit fly (Drosophila yakuba)
MiRBase ID dya-mir-9690
Paralogues
Orthologues
Node of Origin (locus) D. yakuba
Node of Origin (family) D. yakuba
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
X: 11886163-11886224 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-9690)
Mir-978 X: 11883774-11883834 [-] UCSC Ensembl
Mir-977 X: 11885660-11885723 [-] UCSC Ensembl
Mir-976 X: 11885829-11885886 [-] UCSC Ensembl
Mir-975 X: 11885984-11886046 [-] UCSC Ensembl
Mir-9690 X: 11886163-11886224 [-] UCSC Ensembl
Seed AUACGAA
Precursor
(pre-Mir +30nt flank)
GAAAGAAGUCAUCUUGGUAUUAUGGCAACAAGUUUCCGGGACUUCGUACUGUAUGACAGACUAUAUAUACAAUACGAAGCCUCUGAAAUUUUCUGCGCUCAAGUACCAAAAACUACCAGCAA
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Structure
        10        20          30        40        50        60
GAAAGAAGUCAUCUUGGUAUUAUG--|  AC       C   A       C   AUGACAG 
                          GCA  AAGUUUC GGG CUUCGUA UGU       A
                          CGU  UUUAAAG CUC GAAGCAU ACA       C
AACGACCAUCAAAAACCAUGAACUCG^  CU       U   C       A   UAUAUAU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
He Wh
Star sequence

Dya-Mir-9690_5p*

mirBase accessionMIMAT0039184
Sequence
0- AGUUUCCGGGACUUCGUACUGU -22
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Mature sequence

Dya-Mir-9690_3p

mirBase accessionMIMAT0039185
Sequence
40- AAUACGAAGCCUCUGAAAUUUU -62
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