| MirGeneDB ID | Dno-Mir-339 |
|---|
| Family name |
MIR-339 (all species) |
|---|
| Seed |
CCCUGUC |
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| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
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| MiRBase ID |
dno-mir-339
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-339
Cfa-Mir-339
Cpo-Mir-339
Ete-Mir-339
Hsa-Mir-339
Mml-Mir-339
Mmu-Mir-339
Ocu-Mir-339
Rno-Mir-339
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(dasNov3) |
JH583004: 187782-187839 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AGGAGUGCCAGGUCCACGUGGCAGCCGCUCUCCCUGUCCUCCAGGAGCUCACGUGGGUCAGGCUGUGAGCGCCUCGAGGGCAGAGCCCGCGUCUGCCUGCGCGCCCAGCGCCCAGGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGGAGUGCCAGGUCCAC- -| C UCUCC C A UGGG
GU GGCAG CGC CUGUCCUC AGG GCUCACG U
CG CCGUC GCG GACGGGAG UCC CGAGUGU C
GAGGACCCGCGACCCGCG U^ U CCCGA C G CGGA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Mature sequence |
Dno-Mir-339_5p |
| mirBase accession | MIMAT0047821 |
|---|
| Sequence |
0- UCCCUGUCCUCCAGGAGCUCACG -23
Get sequence
|
|---|
| Star sequence |
Dno-Mir-339_3p* |
| mirBase accession | MIMAT0047822 |
|---|
| Sequence |
35- UGAGCGCCUCGAGGGCAGAGCCC -58
Get sequence
|
|---|
