MirGeneDB 2.1

MirGeneDB ID

Dmo-Mir-999

Family name MIR-999 (all species)
Seed GUUAACU
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Aae-Mir-999  Dan-Mir-999  Dme-Mir-999  Dsi-Mir-999  Dya-Mir-999 
Node of Origin (locus) Diptera
Node of Origin (family) Diptera
Genome context
(Dmoj_caf1)
scaffold_6540: 17209669-17209727 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGGGCAGUGAGUCGCCGCUCAAUUACCGUGACAUAGUCGUACGGUGAAUGUUGUUUAUGGAGUCCAAUGUUAACUGUAAGACUGUGUCUCGGUGGUUGCAGCCAAACAACAGCGACCCC
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Structure
        10          20        30        40        50         
AGGGCAGUGAGUCGCCG-  -|        U         G      G      GUUUAU 
                  CU CAAUUACCG GACAUAGUC UACGGU AAUGUU      \
                  GA GUUGGUGGC CUGUGUCAG AUGUCA UUGUAA      G
CCCCAGCGACAACAAACC  C^        U         A      A      CCUGAG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Em Fe Ma Ma
Star sequence

Dmo-Mir-999_5p*

mirBase accessionNone
Sequence
0- ACAUAGUCGUACGGUGAAUGUU -22
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Mature sequence

Dmo-Mir-999_3p

mirBase accessionNone
Sequence
37- UGUUAACUGUAAGACUGUGUCU -59
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