MirGeneDB ID | Dmo-Mir-989 |
Family name |
MIR-989 (all species) |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
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Paralogues |
|
Orthologues |
Aae-Mir-989
Aga-Mir-989
Dan-Mir-989
Dlo-Mir-989
Dme-Mir-989
Dsi-Mir-989
Dya-Mir-989
Gpa-Mir-989
Hme-Mir-989-P1
Hme-Mir-989-P2
Tca-Mir-989
|
Node of Origin (locus) |
Endopterygota
|
Node of Origin (family) |
Endopterygota
|
Genome context (Dmoj_caf1) |
scaffold_6496: 23382321-23382446 [-]
Ensembl
|
Seed |
GUGAUGU |
Precursor (pre-Mir +30nt flank) |
UGGAAAAACGUGAAAAACGAUUCGGGAAUUGGCCACUACCUCGCACUCACGUGAUGCACUCAAAACGCCGACGAGGACGUCCAAAUUCCAUUUUCUCGUUUUCCUCUGUCGUUUUGCGUUGAUUUCAUAUUUCAUGUGAUGUGACGUAGUGGAACAUUCCUGGCGUUGCCCCAGCAAUCCGUGAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60 70 80 90
UGGAAAAACGUGAAAAA- -| UGG C C AUGCACUCAAAACGCCGACGAGGACGUCCAAAUUCCAUU
CGAU UCGGGAAU CCACUAC UCGCA UCACGUG \
GUUG GGUCCUUA GGUGAUG AGUGU AGUGUAC U
AGAGUGCCUAACGACCCC C^ CAA C - UUUAUACUUUAGUUGCGUUUUGCUGUCUCCUUUUGCUCU
180 170 160 150 140 130 120 110 100 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dmo-Mir-989_5p* |
mirBase accession | None |
Sequence |
0- GGCCACUACCUCGCACUCACGUG -23
Get sequence
|
Mature sequence |
Dmo-Mir-989_3p |
mirBase accession | None |
Sequence |
104- UGUGAUGUGACGUAGUGGAACA -126
Get sequence
|