MirGeneDB 2.1

MirGeneDB ID

Dme-Mir-989

Family name MIR-989 (all species)
Seed GUGAUGU
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-989
Paralogues
Orthologues Aae-Mir-989  Dan-Mir-989  Dmo-Mir-989  Dsi-Mir-989  Dya-Mir-989  Hme-Mir-989-P1  Hme-Mir-989-P2  Tca-Mir-989 
Node of Origin (locus) Endopterygota
Node of Origin (family) Endopterygota
Genome context
(Drosophila_melanogaster_BDGP6)
2R: 14145365-14145508 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUAUUUAAGUACAAAGAUUUUGGGAAUCGGCCACUACCUUGCAGUCACGUGAUGAAAAGACACAGGUGACACUGAUCCGGAUUUGGUAGUUGACAAAUCCUCCAUGCCGAGAUUAGUUUCAUUUUGCGUCUUUUGAAUUCGAAUAGUUCAUGUGAUGUGACGUAGUGGAACAUACCUGAAAUUACAAGCAACACGAAGUGAA
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Structure
        10          20        30        40        50        60        70        80        90       100  
UUUUAUUUAAGUACAAA--|    UG  A  CGG       C UG  G       AUGAAAAGACACAGGUGACACUGAUCCGGAUUUGGUAGUUGACAAAUC 
                   GAUUU  GG AU   CCACUAC U  CA UCACGUG                                                \
                   UUAAA  CC UA   GGUGAUG A  GU AGUGUAC                                                C
AAGUGAAGCACAACGAACA^    GU  A  CAA       C GU  -       UUGAUAAGCUUAAGUUUUCUGCGUUUUACUUUGAUUAGAGCCGUACCU 
  200       190       180       170       160        150       140       130       120       110
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo He L3 Fe Fe La Wh
Star sequence

Dme-Mir-989_5p*

mirBase accessionMIMAT0020887
Sequence
0- GGCCACUACCUUGCAGUCACGUG -23
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Mature sequence

Dme-Mir-989_3p

mirBase accessionMIMAT0005506
Sequence
122- UGUGAUGUGACGUAGUGGAACA -144
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Proposed targets microrna.org: MIMAT0005506
TargetScanFly: dme-miR-989