MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-185

Family name MIR-185 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-185
Paralogues
Orthologues Bta-Mir-185  Cfa-Mir-185  Cja-Mir-185  Dno-Mir-185  Eca-Mir-185  Ete-Mir-185  Hsa-Mir-185  Laf-Mir-185  Mml-Mir-185  Mmr-Mir-185  Mmu-Mir-185  Ocu-Mir-185  Pab-Mir-185  Rno-Mir-185 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_4: 19120765-19120820 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-185)		 Mir-185 scaffold_4: 19120765-19120820 [+] UCSC
Mir-1306 scaffold_4: 19154982-19155042 [+] UCSC
Seed GGAGAGA
Precursor
(pre-Mir +30nt flank)		 
UGGGCCUGGCUUGAGUGGGGGGUGAGGGACUGGAGAGAAAGGCAGUUCCUGAUGGUCCCUUCCCCAGGGGCUGGCUUUCCUCUGGUCCUUCCCUCCCAAUGACCACGUUUUCAUCA
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Structure
        10          20        30        40        50        
UGGGCCUGGCUUGAGUG--|    U       UG   A     G         AUGGUC 
                   GGGGG GAGGGAC  GAG GAAAG CAGUUCCUG      \
                   CCCUC CUUCCUG  CUC CUUUC GUCGGGGAC      C
ACUACUUUUGCACCAGUAA^    C       GU   -     G         CCCUUC 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-185_5p
mirBase accessionMIMAT0047054
Sequence 
0- UGGAGAGAAAGGCAGUUCCUGA -22
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Star sequence

Cpo-Mir-185_3p*
mirBase accessionMIMAT0047055
Sequence 
35- AGGGGCUGGCUUUCCUCUGGU -56
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