MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-592

Family name MIR-592 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-592  Cfa-Mir-592  Cpo-Mir-592  Dno-Mir-592  Eca-Mir-592  Ete-Mir-592  Hsa-Mir-592  Laf-Mir-592  Mml-Mir-592  Mmr-Mir-592  Mmu-Mir-592  Ocu-Mir-592  Pab-Mir-592  Rno-Mir-592 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021922.1: 117213356-117213416 [+] UCSC Ensembl
Seed UGUGUCA
Precursor
(pre-Mir +30nt flank)		 
AAUUUAAUUUGAUGCUAUUAUGCCAUGACAUUGUGUCAAUAUGCGAUGAUGUGUUGUGAUGGCACAGCGUCAUCACGUGGUGACGCAACAUCAUGACGUAAGACGUCACAACGCCAGUUAA
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Structure
        10           20        30        40        50         
AAUUUAAUUUGAUGCUA---|    C     CA        A    C        GUUGUG 
                    UUAUG CAUGA  UUGUGUCA UAUG GAUGAUGU      A
                    AAUGC GUACU  AACGCAGU GUGC CUACUGCG      U
AAUUGACCGCAACACUGCAG^    A     AC        G    A        ACACGG 
 .       110       100        90        80        70        60
Deep sequencing
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CommentMir-592 was classified in Fromm et al. (2015) as a non-canonical miRNA as the Dicer cut is always +3 but given the conservation of the sequence and that it is clearly processed by Drosha it is accepted here as a bona fide miRNA.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Cja-Mir-592_5p (predicted)
mirBase accessionNone
Sequence 
0- UUGUGUCAAUAUGCGAUGAUGU -22
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Star sequence

Cja-Mir-592_3p* (predicted)
mirBase accessionNone
Sequence 
39- UCAUCACGUGGUGACGCAACAU -61
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