MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-430-P11

Family name MIR-430 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-430-P1  Cja-Mir-430-P2  Cja-Mir-430-P3  Cja-Mir-430-P4  Cja-Mir-430-P5  Cja-Mir-430-P6  Cja-Mir-430-P7  Cja-Mir-430-P8  Cja-Mir-430-P9  Cja-Mir-430-P10 
Orthologues Hsa-Mir-430-P11  Pab-Mir-430-P11  Sha-Mir-430-o11 
Node of Origin (locus) Simiiformes
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021936.1: 45466698-45466758 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P11)		 Mir-430-P8 CM021936.1: 45463661-45463719 [+] UCSC Ensembl
Mir-430-P9 CM021936.1: 45464331-45464387 [+] UCSC Ensembl
Mir-430-P10 CM021936.1: 45465263-45465320 [+] UCSC Ensembl
Mir-430-P11 CM021936.1: 45466698-45466758 [+] UCSC Ensembl
Seed AAGUGCU
Precursor
(pre-Mir +30nt flank)		 
UGCUGGAGCAAGACUAUCUCAUGCUGUGACCCUCAAGAUGGAAGCAAUUUCUGUUGUCUGAAAGGAAGGAAAGUGCUUUCUUUUUGAGAGUUACUGUUUGGGAAAAGCAACCUUGAUGCUG
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Structure
        10          20        30        40        50          
UGCUGGAGCAAGACUAU--|   U  U     C       U       A     GUUGUCU 
                   CUCA GC GUGAC CUCAAGA GGAAGCA UUUCU       \
                   GGGU UG CAUUG GAGUUUU CUUUCGU AAAGG       G
GUCGUAGUUCCAACGAAAA^   U  U     A       U       G     AAGGAAA 
 .       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Cja-Mir-430-P11_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUCAAGAUGGAAGCAAUUUCU -22
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Mature sequence

Cja-Mir-430-P11_3p (predicted)
mirBase accessionNone
Sequence 
39- AAAGUGCUUUCUUUUUGAGAGU -61
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