MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-8908-P4a1

Family name MIR-8908 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-8908d-1
Paralogues Cfa-Mir-8908-P1a1  Cfa-Mir-8908-P1a2  Cfa-Mir-8908-P1b  Cfa-Mir-8908-P1c  Cfa-Mir-8908-P1d  Cfa-Mir-8908-P2  Cfa-Mir-8908-P3  Cfa-Mir-8908-P4a2  Cfa-Mir-8908-P4b  Cfa-Mir-8908-P4c  Cfa-Mir-8908-P5  Cfa-Mir-8908-P6  Cfa-Mir-8908-P7  Cfa-Mir-8908-P8 
Orthologues
Node of Origin (locus) C. familiaris
Node of Origin (family) C. familiaris
Genome context
(canFam3_add)		 chrX: 114688877-114688935 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-8908-P4a1)		 Mir-8908-P3 chrX: 114675836-114675892 [-] UCSC Ensembl
Mir-8908-P5 chrX: 114676848-114676903 [-] UCSC Ensembl
Mir-8908-P2 chrX: 114678505-114678561 [-] UCSC Ensembl
Mir-8908-P4a2 chrX: 114679976-114680034 [-] UCSC Ensembl
Mir-8908-P1c chrX: 114680911-114680970 [-] UCSC Ensembl
Mir-8908-P1a2 chrX: 114684100-114684159 [-] UCSC Ensembl
Mir-8908-P4b chrX: 114686169-114686227 [-] UCSC Ensembl
Mir-8908-P1b chrX: 114687030-114687089 [-] UCSC Ensembl
Mir-8908-P4a1 chrX: 114688877-114688935 [-] UCSC Ensembl
Mir-8908-P1a1 chrX: 114689813-114689872 [-] UCSC Ensembl
Mir-8908-P6 chrX: 114717103-114717160 [-] UCSC Ensembl
Seed UUAGCGC
Precursor
(pre-Mir +30nt flank)		 
UCUCCUGCGGGCCACGCUGAGUUUAGGGCCCUACCCAGAAAGGUGCUGAUGAGGCAGGAUACAGAUUAUUAGCGCCUGACUGAGUGGGGUCCCAAUCAGUAACAGAACUGCCCGUGGCG
Get precursor sequence
Structure
        10            20        30        40        50         
UCUCCUGCGGGCCACGC----|  GUUUA         C   AA            GGCAGG 
                     UGA     GGGCCCUAC CAG  AGGUGCUGAUGA      \
                     ACU     CCUGGGGUG GUC  UCCGCGAUUAUU      A
GCGGUGCCCGUCAAGACAAUG^  AAC--         A   AG            AGACAU 
       110       100          90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-8908-P4a1_5p*
mirBase accessionNone
Sequence 
0- CUACCCAGAAAGGUGCUGAUGA -22
Get sequence
Mature sequence

Cfa-Mir-8908-P4a1_3p
mirBase accessionMIMAT0034420
Sequence 
37- AUUAGCGCCUGACUGAGUGGGG -59
Get sequence