MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-1343

Family name MIR-1343 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-1343
Paralogues
Orthologues Bta-Mir-1343  Cja-Mir-1343  Cpo-Mir-1343  Dno-Mir-1343  Eca-Mir-1343  Hsa-Mir-1343  Laf-Mir-1343  Ocu-Mir-1343  Pab-Mir-1343 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr18: 32990120-32990178 [-] UCSC Ensembl
Seed UCCUGGG
Precursor
(pre-Mir +30nt flank)		 
AGGAACCAACGAUGAUGCUGGCUUCGGUGCUGGGGAGCGGCCCCCGGGCGGGCCUCUGCUCUGGCCCCUCCUGGGGCCCGCACUCUCGCUCCGGGCCCGCUCCACCUCGGCUGCUGACA
Get precursor sequence
Structure
        10           20        30        40        50         
AGGAACCAACGAUGAUGCU---|   U   U  U    A    C       C   CCUCUG 
                      GGCU CGG GC GGGG GCGG CCCCGGG GGG      \
                      CCGG GCC CG UCUC CGCC GGGGUCC CCC      C
ACAGUCGUCGGCUCCACCUCGC^   -   U  C    A    C       U   CGGUCU 
       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-1343_5p*
mirBase accessionNone
Sequence 
0- UGGGGAGCGGCCCCCGGGCGGG -22
Get sequence
Mature sequence

Cfa-Mir-1343_3p
mirBase accessionMIMAT0034357
Sequence 
37- CUCCUGGGGCCCGCACUCUCGC -59
Get sequence
Proposed targets TargetScanVert: cfa-miR-1343
miRDB: MIMAT0034357