| MirGeneDB ID | Bta-Mir-9851 |
|---|
| Family name |
MIR-9851 (all species) |
|---|
| Species |
Cow (Bos taurus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cfa-Mir-9851
Eca-Mir-9851
Ete-Mir-9851
Hsa-Mir-9851
Laf-Mir-9851
Mml-Mir-9851
Mmr-Mir-9851
Ocu-Mir-9851
Pab-Mir-9851
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037353.1: 37221499-37221555 [-]
UCSC
Ensembl
|
|---|
| Seed |
GGCACCA |
|---|
Precursor
(pre-Mir +30nt flank) |
CGGCGGUGGCAGCAGAGGCGGUGAGCCCGGCGCUGGCAGUGUUGGUGGCACUUGCGUGGGGGCGGUGGCACCAGCACUGGCGGUGGCGGUGGCACCAGCACGGGCAGCACCUGUACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGGCGGUGGCAGCAGAG- -| AGC G G G UGCGU
GC GGUG CCG CGCUG CAGUGUUGGUG CACU \
CG CCAC GGC GUGGC GUCACGACCAC GUGG G
ACAUGUCCACGACGGGCA A^ GGU G G G CGGGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Bta-Mir-9851_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGCUGGCAGUGUUGGUGGCACU -22
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-9851_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UGGCACCAGCACUGGCGGUGGC -57
Get sequence
|
|---|
