MirGeneDB 2.1
MirGeneDB ID

Bla-Mir-22-o3c1

Family name MIR-22 (all species)
Seed AGCUGGC
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-22-o1a  Bla-Mir-22-o1b  Bla-Mir-22-o1c  Bla-Mir-22-o3a1a  Bla-Mir-22-o3a1b  Bla-Mir-22-o3a1c  Bla-Mir-22-o3a1d  Bla-Mir-22-o3a2a  Bla-Mir-22-o3a2b  Bla-Mir-22-o3a3  Bla-Mir-22-o3b1  Bla-Mir-22-o3b2  Bla-Mir-22-o3b3  Bla-Mir-22-o3c2  Bla-Mir-22-P1 
Orthologues
Node of Origin (locus) B. lanceolatum
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000015: 694132-694190 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAAAUCCUAUACGGGCCUUGCUAAGCGUUUUUCGUCGCCGGCACAGCUCUGUGACAGUGGAAUCAUAGCUGGCUGGCGAAGAAAAUUCCUUUCAAGGUACUCUCUACAUAAAACCAC
Get precursor sequence
Structure
        10           20        30        40        50         
AAAAAAUCCUAUACGGG---|    CU   CGU     G        A     C  UGACA 
                    CCUUG  AAG   UUUUC UCGCCGGC CAGCU UG     G
                    GGAAC  UUC   AAAAG AGCGGUCG GUCGA AC     U
CACCAAAAUACAUCUCUCAU^    U-   CUU     A        -     U  UAAGG 
       110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-22-o3c1_5p*
mirBase accessionNone
Sequence 
0- UUUUCGUCGCCGGCACAGCUCUG -23
Get sequence
Mature sequence

Bla-Mir-22-o3c1_3p
mirBase accessionNone
Sequence 
37- UAGCUGGCUGGCGAAGAAAAUU -59
Get sequence