MirGeneDB 2.1
MirGeneDB ID

Bla-Mir-193-P1e

Family name MIR-193 (all species)
Seed ACUGGCC
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-193-P1f1  Bla-Mir-193-P1f2  Bla-Mir-193-P1g1  Bla-Mir-193-P1g2  Bla-Mir-193-P1h1  Bla-Mir-193-P1h2  Bla-Mir-193-P1i1  Bla-Mir-193-P1i2  Bla-Mir-193-P1j1  Bla-Mir-193-P1j2  Bla-Mir-193-P1k 
Orthologues Aae-Mir-193-P1  Bfl-Mir-193-P1e  Bge-Mir-193-P1  Cbr-Mir-193-P1-v1  Cbr-Mir-193-P1-v2  Cel-Mir-193-P1-v1  Cel-Mir-193-P1-v2  Cgi-Mir-193-P1  Cte-Mir-193-P1  Dan-Mir-193-P1-v1  Dan-Mir-193-P1-v2  Dan-Mir-193-P1-v3  Dan-Mir-193-P1-v4  Dma-Mir-193-P1  Dme-Mir-193-P1-v1  Dme-Mir-193-P1-v2  Dme-Mir-193-P1-v3  Dme-Mir-193-P1-v4  Dmo-Mir-193-P1-v1  Dmo-Mir-193-P1-v2  Dmo-Mir-193-P1-v3  Dmo-Mir-193-P1-v4  Dpu-Mir-193-P1  Dsi-Mir-193-P1-v1  Dsi-Mir-193-P1-v2  Dsi-Mir-193-P1-v3  Dsi-Mir-193-P1-v4  Dya-Mir-193-P1-v1  Dya-Mir-193-P1-v2  Dya-Mir-193-P1-v3  Dya-Mir-193-P1-v4  Esc-Mir-193-P1  Hme-Mir-193-P1  Isc-Mir-193-P1  Lgi-Mir-193-P1  Npo-Mir-193-P1  Obi-Mir-193-P1  Ovu-Mir-193-P1  Pma-Mir-193-P1  Pmi-Mir-193-P1  Tca-Mir-193-P1  Xbo-Mir-193-P1 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000095: 151599-151657 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAUUUCAUCGAAUUUCACGCAUGCUCAAUAAAGACUUAAGGGAACAGUCGGUGUCUAUCAGUUUCCCACUGGCCGUUUAAGUCCCGAUUGACGUUUGUGAAUCCUCGUCGUUUGUAGU
Get precursor sequence
Structure
        10         20         30        40         50         
GAAUUUCAUCGAAUUUCA-    U  -     AAA        -| AA    C  UGUCUA 
                   CGCA GC UCAAU   GACUUAAG GG  CAGU GG      \
                   GUGU UG AGUUA   CUGAAUUU CC  GUCA CC      U
UGAUGUUUGCUGCUCCUAA    U  C     GCC        G^ G-    C  UUUGAC 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-193-P1e_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAAGACUUAAGGGAACAGUCGG -22
Get sequence
Mature sequence

Bla-Mir-193-P1e_3p
mirBase accessionNone
Sequence 
37- CACUGGCCGUUUAAGUCCCGAU -59
Get sequence