| MirGeneDB ID | Bge-Mir-927-P2-v2 |
|---|
| Family name |
MIR-927 (all species) |
|---|
| Seed |
UUAGAAU |
|---|
| Species |
Cockroach (Blattella germanica) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Bge-Mir-927-P1
Bge-Mir-927-P2-v1
|
|---|
| Orthologues |
Aae-Mir-927-P2
Hme-Mir-927-P2
Tca-Mir-927-P2
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(Bger_2.0) |
KZ614944.1: 401462-401524 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUUGACAUUGGAAAUUAUUGCUCGCUUCGUUUUAGAAUUUGUACGCUUUGUUGUAAUUUUUUUAAAAAUCACAAAGCAUAUGGAUUCUUGAGCGGAUUGUGCAAUACAAGCUACUACAGAUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUUGACAUUGGAAAUUA--| U C U UG C UGUAAUUUU
UUGC CG UUCGUUU AGAAUU UA GCUUUGU \
AACG GU AGGCGAG UCUUAG AU CGAAACA U
GGUAGACAUCAUCGAACAU^ U U U GU A CUAAAAAUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bge-Mir-927-P2-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUUAGAAUUUGUACGCUUUGUU -22
Get sequence
|
|---|
| Star sequence |
Bge-Mir-927-P2-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- CAAAGCAUAUGGAUUCUUGAGC -63
Get sequence
|
|---|
