| MirGeneDB ID | Aga-Mir-927-P2 |
|---|
| Family name |
MIR-927 (all species) |
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| Species |
African malaria mosquito (Anopheles gambiae) |
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| MiRBase ID |
aga-mir-10365
|
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| Paralogues |
Aga-Mir-927-P1
|
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| Orthologues |
Aae-Mir-927-P2
Bge-Mir-927-P2-v1
Dlo-Mir-927-P2
Hme-Mir-927-P2
Tca-Mir-927-P2
|
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064602.1: 74864913-74864980 [+]
Ensembl
|
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| Seed |
UUAGAAU |
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Precursor
(pre-Mir +30nt flank) |
AACGGUCGCAUUACACGAUCAAGGAUGUCCAUUAGAAUGUGGAAUCUGUUUUUGUACCUGUUACAGAAAUAUGCAAAAAAGUUUUCAUAUUCUUGCGGUCAUCUUUGAGCAGACGCAUCAAAGACCCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AACGGUCGCAUUACACGA--| U AUU U G GUACCUGUUA
UCAAGGAUG CC AGAAUGUGGAA CU UUUUU \
AGUUUCUAC GG UCUUAUACUUU GA AAAAA C
CCCCAGAAACUACGCAGACG^ U CGU U - CGUAUAAAGA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Ab |
Ab |
He |
He |
Mi |
Mi |
Ov |
Ov |
Ov |
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| Mature sequence |
Aga-Mir-927-P2_5p |
| mirBase accession | MIMAT0041535 |
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| Sequence |
0- AUUAGAAUGUGGAAUCUGUUUUU -23
Get sequence
|
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| Star sequence |
Aga-Mir-927-P2_3p* |
| mirBase accession | MIMAT0041536 |
|---|
| Sequence |
46- AAAAGUUUUCAUAUUCUUGCGG -68
Get sequence
|
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