MirGeneDB 3.0

6 Tetraodon nigroviridis microRNA genes with seed AAAGUGC (all species)
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Sp Sp Sp To
Tni-Mir-17-P4d None MIR-17 AAAGUGC None None 1 5569901 5569959 - Gnathostomata Vertebrata No
Tni-Mir-17-P4a2 tni-mir-20 MIR-17 AAAGUGC MIMAT0003084 None 2 12892494 12892553 + Clupeocephala Vertebrata No 1
Tni-Mir-17-P4a1 None MIR-17 AAAGUGC None None 5 8188398 8188455 - Clupeocephala Vertebrata No 1 1
Tni-Mir-17-P1d None MIR-17 AAAGUGC None None 1 5570107 5570169 - Gnathostomata Vertebrata No 1
Tni-Mir-17-P1a2 tni-mir-17-2 MIR-17 AAAGUGC MIMAT0002917 None 2 12891981 12892039 + Clupeocephala Vertebrata No
Tni-Mir-17-P1a1 tni-mir-17-1 MIR-17 AAAGUGC MIMAT0002917 None 5 8188866 8188926 - Clupeocephala Vertebrata No

(red - mature/co-mature, blue - star)

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