MirGeneDB 3.0

5 Caenorhabditis briggsae microRNA genes of family MIR-54 (all species)
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Cbr-Mir-54-P3 cbr-mir-56 MIR-54 ACCCGUA MIMAT0011475 MIMAT0011476 X 16963349 16963415 - Caenorhabditis Chromadorea No
Cbr-Mir-54-P2 cbr-mir-55 MIR-54 ACCCGUA None MIMAT0001310 X 16963478 16963540 - Caenorhabditis Chromadorea No
Cbr-Mir-54-P1c cbr-mir-54d MIR-54 ACCCGUA None MIMAT0011496 X 16964087 16964152 - C. briggsae Chromadorea No
Cbr-Mir-54-P1b V cbr-mir-54b MIR-54 CGAACCU None MIMAT0011494 X 16963615 16963679 - C. briggsae Chromadorea 2 No
Cbr-Mir-54-P1a cbr-mir-54a MIR-54 ACCCGUA MIMAT0011477 MIMAT0011478 X 16963777 16963838 - C. briggsae Chromadorea No

(red - mature/co-mature, blue - star)

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