MirGeneDB 3.0

6 Alligator mississippiensis microRNA genes of family MIR-181 (all species)
Sort by genome coordinates Motifs Tissue expression
- +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC To
Ami-Mir-181-P1a ami-mir-181a-1 MIR-181 ACAUUCA MIMAT0038186 MIMAT0038187 NW_017710806.1 1539186 1539247 - Gnathostomata Vertebrata No 1 1
Ami-Mir-181-P1b ami-mir-181a-2 MIR-181 ACAUUCA MIMAT0038186 MIMAT0038188 NW_017711793.1 111753 111815 + Gnathostomata Vertebrata No
Ami-Mir-181-P1c ami-mir-181a-3 MIR-181 ACAUUCA MIMAT0038186 MIMAT0038189 NW_017713323.1 106446 106507 - Gnathostomata Vertebrata No 1
Ami-Mir-181-P2a ami-mir-181b-1 MIR-181 ACAUUCA MIMAT0038190 MIMAT0038191 NW_017710806.1 1538992 1539052 - Gnathostomata Vertebrata No
Ami-Mir-181-P2b ami-mir-181b-2 MIR-181 ACAUUCA MIMAT0038190 MIMAT0038192 NW_017711793.1 113586 113645 + Gnathostomata Vertebrata No
Ami-Mir-181-P2c ami-mir-181b-3 MIR-181 ACAUUCA MIMAT0038190 MIMAT0038193 NW_017713323.1 105423 105485 - Gnathostomata Vertebrata No 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix