MirGeneDB 2.1
116 microRNA genes with node of origin Marsupialia
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Mdo-Mir-430-P51 mdo-mir-1643b MIR-430 AAAGUGC MIMAT0028598 MIMAT0028599 4 400890701 400890759 - Marsupialia Vertebrata No 1
Sha-Mir-430-P51 None MIR-430 AAGUGCU None None GL849772.1 42803 42860 - Marsupialia Vertebrata No 1
Mdo-Mir-1540 mdo-mir-1540b MIR-1540 CAUGCGC MIMAT0028938 MIMAT0028939 1 580149267 580149325 + Marsupialia Marsupialia No
Sha-Mir-1540 sha-mir-1540 MIR-1540 CAUGCGC None MIMAT0022781 GL836570.1 10682 10740 + Marsupialia Marsupialia No
Mdo-Mir-1541 mdo-mir-1541 MIR-1541 GGUGUGC MIMAT0006140 None 4 400891450 400891510 - Marsupialia Marsupialia No 1
Sha-Mir-1541 None MIR-1541 GGUGUGC None None GL849772.1 43949 44008 - Marsupialia Marsupialia No 1
Mdo-Mir-1542 mdo-mir-1542-2 MIR-1542 AUUGAUC MIMAT0031061 MIMAT0006141 8 87784990 87785051 - Marsupialia Marsupialia No 1 1
Sha-Mir-1542 None MIR-1542 AUUGAUC None None GL861605.1 2615775 2615836 - Marsupialia Marsupialia No 1
Mdo-Mir-1546 mdo-mir-1546 MIR-1546 CAGGGAU MIMAT0006146 MIMAT0026770 3 518067385 518067445 - Marsupialia Marsupialia No 1 1
Sha-Mir-1546 sha-mir-1546 MIR-1546 CAGGGAU MIMAT0022795 None GL842385.1 61312 61372 - Marsupialia Marsupialia No 1 1
Mdo-Mir-1546-as mdo-mir-1546b MIR-1546 AGGGAUU MIMAT0050235 MIMAT0050236 3 518067388 518067446 + Marsupialia Marsupialia No 1
Sha-Mir-1546-as None MIR-1546 AGGGAUU None None GL842385.1 61315 61373 + Marsupialia Marsupialia No
Mdo-Mir-1547 mdo-mir-1547 MIR-1547 AUCAGAG MIMAT0006147 MIMAT0026771 4 335163709 335163769 - Marsupialia Marsupialia No 1
Sha-Mir-1547 None MIR-1547 AUCAGAG None None GL849719.1 3577129 3577189 - Marsupialia Marsupialia No 1
Mdo-Mir-1549 mdo-mir-1549b MIR-1549 UCCGCCC MIMAT0050368 MIMAT0050369 Un 60423751 60423809 + Marsupialia Marsupialia No
Sha-Mir-1549 sha-mir-1549 MIR-1549 CCGGGCU None MIMAT0022824 GL861612.1 2123649 2123706 + Marsupialia Marsupialia Yes 1
Mdo-Mir-7246 mdo-mir-7246 MIR-7246 UGGAAAC MIMAT0028458 MIMAT0028459 1 704776839 704776899 - Marsupialia Marsupialia No
Sha-Mir-7246 None MIR-7246 UGGAAAC None None GL834772.1 117919 117979 - Marsupialia Marsupialia No
Mdo-Mir-7247 mdo-mir-7247 MIR-7247 CGCGACA MIMAT0028460 MIMAT0028461 1 11130354 11130410 + Marsupialia Marsupialia No 1
Sha-Mir-7247 None MIR-7247 CGCGACA None None GL834418.1 823099 823155 + Marsupialia Marsupialia No 1
Mdo-Mir-7251 mdo-mir-7251 MIR-7251 CUAAGCU MIMAT0028468 MIMAT0028469 1 366217902 366217964 + Marsupialia Marsupialia No 1
Sha-Mir-7251 None MIR-7251 CUAAGCU None None GL834618.1 1223501 1223563 + Marsupialia Marsupialia No 1
Mdo-Mir-7254-v1 mdo-mir-7254 MIR-7254 CACCACC MIMAT0028474 MIMAT0028475 1 398141671 398141731 + Marsupialia Marsupialia No
Sha-Mir-7254-v1 None MIR-7254 CACCACC None None GL834628.1 2737210 2737270 + Marsupialia Marsupialia No
Mdo-Mir-7254-v2 mdo-mir-7254 MIR-7254 UCACCAC MIMAT0028474 MIMAT0028475 1 398141670 398141732 + Marsupialia Marsupialia No 1
Sha-Mir-7254-v2 None MIR-7254 UCACCAC None None GL834628.1 2737209 2737271 + Marsupialia Marsupialia No 1
Mdo-Mir-7262-P1 mdo-mir-7262a MIR-7262 ACAACGG MIMAT0028490 MIMAT0028491 2 142994546 142994600 - Marsupialia Marsupialia No 1
Mdo-Mir-7262-P2 mdo-mir-7262b MIR-7262 AACUGGA MIMAT0028544 MIMAT0028545 2 44490335 44490394 - Marsupialia Marsupialia No
Mdo-Mir-7262-P3 None MIR-7262 AACUGCA None None 1 195829696 195829754 - Marsupialia Marsupialia No
Mdo-Mir-7262-P4 mdo-mir-7262f MIR-7262 AACUGUG MIMAT0050399 MIMAT0050400 X 18001896 18001954 - Marsupialia Marsupialia No 1
Mdo-Mir-7262-P5 None MIR-7262 AACUGCU None None 4 320770574 320770632 + Marsupialia Marsupialia Unknown
Mdo-Mir-7262-P6 mdo-mir-7262g MIR-7262 AAAACGG MIMAT0050244 MIMAT0050245 4 190697491 190697546 - Marsupialia Marsupialia No 1 1
Sha-Mir-7262-P6 None MIR-7262 AAAACCG None None GL861558.1 240943 240997 - Marsupialia Marsupialia Unknown
Mdo-Mir-7262-P7 mdo-mir-7262l MIR-7262 AACUGCU MIMAT0050292 MIMAT0050293 5 223280789 223280847 - Marsupialia Marsupialia No 1
Sha-Mir-7262-P7 None MIR-7262 AACUGCU None None GL864869.1 2173450 2173508 - Marsupialia Marsupialia Unknown 1
Mdo-Mir-7281 mdo-mir-7281 MIR-7281 AAUAGGC MIMAT0028536 MIMAT0028537 2 37484368 37484427 + Marsupialia Marsupialia No 1 1
Sha-Mir-7281 None MIR-7281 AAUAGGC None None GL856741.1 166054 166114 + Marsupialia Marsupialia No 1
Mdo-Mir-7284 mdo-mir-7284 MIR-7284 UACCAAC MIMAT0028542 MIMAT0028543 2 21758873 21758934 - Marsupialia Marsupialia No 1
Sha-Mir-7284 None MIR-7284 UACCAAC None None GL856734.1 1498136 1498197 - Marsupialia Marsupialia No 1
Mdo-Mir-7286 mdo-mir-7286 MIR-7286 AUUUUAG MIMAT0028548 MIMAT0028549 3 410851524 410851584 - Marsupialia Marsupialia No 1
Sha-Mir-7286 None MIR-7286 AUUUUAG None None GL841396.1 685250 685310 - Marsupialia Marsupialia No 1
Mdo-Mir-7292 mdo-mir-7292 MIR-7292 AGGAAGG MIMAT0028568 MIMAT0028569 1 118003103 118003165 - Marsupialia Marsupialia No
Sha-Mir-7292 None MIR-7292 UGCUAGG None None GL834469.1 975130 975190 - Marsupialia Marsupialia No
Mdo-Mir-7293 mdo-mir-7293 MIR-7293 CGCUGGG MIMAT0028570 MIMAT0028571 3 362140420 362140476 + Marsupialia Marsupialia Yes 1
Sha-Mir-7293 None MIR-7293 CGCUGGG None None GL841369.1 68150 68206 + Marsupialia Marsupialia No 1
Mdo-Mir-7303-P1-v1 mdo-mir-7305 MIR-7303 CAUCCAA MIMAT0028604 MIMAT0028605 4 400892027 400892085 - Marsupialia Marsupialia No
Sha-Mir-7303-P1-v1 None MIR-7303 UAUGCGU None None GL849772.1 44547 44605 - Marsupialia Marsupialia No
Mdo-Mir-7303-P1-v2 mdo-mir-7305 MIR-7303 CAUCCAA MIMAT0028604 MIMAT0028605 4 400892027 400892085 - Marsupialia Marsupialia No
Sha-Mir-7303-P1-v2 None MIR-7303 AUGCGUC None None GL849772.1 44547 44605 - Marsupialia Marsupialia No
Mdo-Mir-7303-P2 mdo-mir-7303 MIR-7303 AGGCGUC MIMAT0028600 MIMAT0028601 4 400890972 400891034 - Marsupialia Marsupialia No 1
Sha-Mir-7303-P2 None MIR-7303 AGGCGUC None None GL849772.1 43147 43201 - Marsupialia Marsupialia No 1
Mdo-Mir-7304 mdo-mir-7304 MIR-7304 AUGGGGU MIMAT0028602 MIMAT0028603 4 400891594 400891652 - Marsupialia Marsupialia No 1
Sha-Mir-7304 None MIR-7304 AUGGGGU None None GL849772.1 44094 44152 - Marsupialia Marsupialia No 1
Mdo-Mir-7309 mdo-mir-7309 MIR-7309 CAAUGUG MIMAT0028616 MIMAT0028617 4 362633939 362633998 + Marsupialia Marsupialia Yes 1 1
Sha-Mir-7309 None MIR-7309 CAAUGUG None None GL849745.1 178841 178900 + Marsupialia Marsupialia Yes 1 1
Mdo-Mir-7319 mdo-mir-7319 MIR-7319 AAGUUGG MIMAT0028638 MIMAT0028639 5 268329078 268329139 + Marsupialia Marsupialia Yes 1
Sha-Mir-7319 None MIR-7319 AAGUUGG None None GL864888.1 2871889 2871950 + Marsupialia Marsupialia Yes 1
Mdo-Mir-7323 mdo-mir-7323 MIR-7323 UACAGAA MIMAT0028646 MIMAT0028647 5 110351157 110351219 - Marsupialia Marsupialia No 1
Sha-Mir-7323 None MIR-7323 UACAGAA None None GL864807.1 149348 149410 - Marsupialia Marsupialia No 1
Mdo-Mir-7327 mdo-mir-7327 MIR-7327 GCGAUUU MIMAT0028656 MIMAT0028657 6 243825029 243825089 + Marsupialia Marsupialia No
Sha-Mir-7327 None MIR-7327 GCGAUUU None None GL841597.1 2928387 2928447 + Marsupialia Marsupialia No
Mdo-Mir-7332 mdo-mir-7332 MIR-7332 CUGAAUC MIMAT0028672 MIMAT0028673 6 214337424 214337486 - Marsupialia Marsupialia No 1
Sha-Mir-7332 None MIR-7332 CUGAAUC None None GL841586.1 3883819 3883881 - Marsupialia Marsupialia No 1
Mdo-Mir-7333 mdo-mir-7333 MIR-7333 CUGUUGC MIMAT0028674 MIMAT0028675 6 214453341 214453398 - Marsupialia Marsupialia No 1
Sha-Mir-7333 None MIR-7333 CUGUUGC None None GL841586.1 3994610 3994667 - Marsupialia Marsupialia No 1
Mdo-Mir-7336 mdo-mir-7336 MIR-7336 CGCACAC MIMAT0028680 MIMAT0028681 7 86952927 86952986 + Marsupialia Marsupialia No 1
Sha-Mir-7336 None MIR-7336 GUGGAUG None None GL849847.1 565226 565285 + Marsupialia Marsupialia No 1
Mdo-Mir-7363 mdo-mir-7363 MIR-7363 UACCCAA MIMAT0028738 MIMAT0028739 X 7282210 7282268 - Marsupialia Marsupialia No 1
Sha-Mir-7363 None MIR-7363 UACCCAA None None GL867574.1 1360824 1360882 - Marsupialia Marsupialia No 1
Mdo-Mir-7368 mdo-mir-7368 MIR-7368 GAGUAGG MIMAT0028758 MIMAT0028759 X 26897673 26897733 - Marsupialia Marsupialia No 1 1
Sha-Mir-7368 None MIR-7368 CACCAGC None None GL867589.1 242556 242616 - Marsupialia Marsupialia No 1 1
Mdo-Mir-7370 mdo-mir-7370 MIR-7370 AGGGAUA MIMAT0028762 MIMAT0028763 X 38866830 38866888 - Marsupialia Marsupialia No 1
Sha-Mir-7370 None MIR-7370 UUCACAC None None GL867598.1 1366572 1366630 - Marsupialia Marsupialia No 1
Mdo-Mir-7371-P13 mdo-mir-7387 MIR-7371 AGGAAUA MIMAT0028838 MIMAT0028839 X 40473856 40473914 + Marsupialia Marsupialia No 1
Sha-Mir-7371-P13 None MIR-7371 AGGAAUA None None GL867599.1 266975 267033 + Marsupialia Marsupialia No 1
Mdo-Mir-7371-P39 mdo-mir-7390 MIR-7371 UUUGUAC MIMAT0028876 MIMAT0028877 X 40522765 40522822 + Marsupialia Marsupialia No 1
Sha-Mir-7371-P39 None MIR-7371 AUUGUAC None None GL867599.1 325951 326008 + Marsupialia Marsupialia No 1
Mdo-Mir-7376 mdo-mir-7376 MIR-7376 AGCUCGC MIMAT0028808 MIMAT0028809 X 57502218 57502278 - Marsupialia Marsupialia No 1
Sha-Mir-7376 None MIR-7376 AGCUCGC None None GL867608.1 2170658 2170715 - Marsupialia Marsupialia No 1 1
Mdo-Mir-7377 mdo-mir-7377 MIR-7377 CAUCCUG MIMAT0028810 MIMAT0028811 X 15052712 15052769 + Marsupialia Marsupialia No
Sha-Mir-7377 None MIR-7377 CAUCCUG None None GL867584.1 9048 9105 + Marsupialia Marsupialia No 1
Mdo-Mir-7378 mdo-mir-7378 MIR-7378 UGGGACA MIMAT0028812 MIMAT0028813 X 67691162 67691220 - Marsupialia Marsupialia No 1
Sha-Mir-7378 None MIR-7378 UGGGGCA None None GL867615.1 419657 419715 - Marsupialia Marsupialia No 1
Mdo-Mir-7379 mdo-mir-7379 MIR-7379 CUGGAUG MIMAT0028814 MIMAT0028815 X 67706763 67706819 - Marsupialia Marsupialia No 1 1
Sha-Mir-7379 None MIR-7379 CUGGAUG None None GL867615.1 435332 435388 - Marsupialia Marsupialia No 1 1
Sha-Mir-7392-P1 None MIR-7392 ACGAGUA None None GL867604.1 507292 507347 + Marsupialia Marsupialia No 1
Mdo-Mir-7394-P1 mdo-mir-7394a MIR-7394 AUGUGUG MIMAT0028886 MIMAT0028887 X 47660934 47660987 + Marsupialia Marsupialia No 1
Sha-Mir-7394-P1 None MIR-7394 AUGUGUG None None GL867604.1 514669 514722 + Marsupialia Marsupialia No 1 1
Mdo-Mir-7394-P2 mdo-mir-7394c MIR-7394 GUGACCU MIMAT0050440 MIMAT0050441 X 47667188 47667241 + Marsupialia Marsupialia No
Sha-Mir-7394-P2 None MIR-7394 GUGACCU None None GL867604.1 524445 524498 + Marsupialia Marsupialia No
Mdo-Mir-7394-P3 mdo-mir-7394b MIR-7394 GUGACCU MIMAT0028894 MIMAT0028895 X 47675602 47675655 + Marsupialia Marsupialia No
Sha-Mir-7394-P3 None MIR-7394 GUGACCU None None GL867604.1 530112 530166 + Marsupialia Marsupialia Yes 1 1
Mdo-Mir-7397 mdo-mir-7397 MIR-7397 GACCAAG MIMAT0028892 MIMAT0028893 X 47672118 47672173 + Marsupialia Marsupialia No 1 1
Sha-Mir-7397 None MIR-7397 AUCUGUA None None GL867604.1 528131 528186 + Marsupialia Marsupialia No 1
Mdo-Mir-12316-v1 None MIR-12316 UGAAAGG None None 1 727221039 727221103 - Marsupialia Marsupialia No 1
Mdo-Mir-12316-v2 None MIR-12316 UUGAAAG None None 1 727221039 727221103 - Marsupialia Marsupialia No 1
Mdo-Mir-12355 mdo-mir-12355 MIR-12355 CGGAGGU MIMAT0050264 MIMAT0050265 4 380255120 380255178 - Marsupialia Marsupialia No 1 1
Sha-Mir-12355 None MIR-12355 CGGAGGU None None GL849755.1 1249930 1249988 - Marsupialia Marsupialia No 1 1
Mdo-Mir-12358-P2-v1 mdo-mir-12358 MIR-12358 ACCGAUG MIMAT0050271 MIMAT0050272 4 395872534 395872594 + Marsupialia Marsupialia No 1
Sha-Mir-12358-P2-v1 None MIR-12358 ACCGAUG None None GL849765.1 1285711 1285771 + Marsupialia Marsupialia No 1
Mdo-Mir-12358-P2-v2 mdo-mir-12358 MIR-12358 UACCGAU MIMAT0050271 MIMAT0050272 4 395872533 395872595 + Marsupialia Marsupialia No 1
Sha-Mir-12358-P2-v2 None MIR-12358 UACCGAU None None GL849765.1 1285710 1285772 + Marsupialia Marsupialia No 1 1
Mdo-Mir-12366-v1 mdo-mir-12366a MIR-12366 UCAAAGG MIMAT0050294 MIMAT0050295 5 223399571 223399626 + Marsupialia Marsupialia No 1
Sha-Mir-12366-v1 None MIR-12366 UCAAAGG None None GL864869.1 2267881 2267936 + Marsupialia Marsupialia No 1
Mdo-Mir-12366-v2 mdo-mir-12366a MIR-12366 CAAAGGA MIMAT0050294 MIMAT0050295 5 223399571 223399626 + Marsupialia Marsupialia No 1
Sha-Mir-12366-v2 None MIR-12366 CAAAGGA None None GL864869.1 2267881 2267936 + Marsupialia Marsupialia No 1
Mdo-Mir-12380 mdo-mir-12380 MIR-12380 UCCCUCC MIMAT0050323 MIMAT0050324 6 214307234 214307289 - Marsupialia Marsupialia No
Sha-Mir-12380 None MIR-12380 UCCCUCC None None GL841586.1 3856147 3856202 - Marsupialia Marsupialia No
Mdo-Mir-12404 mdo-mir-12404 MIR-12404 GGUGAAG MIMAT0050449 MIMAT0050450 X 63562541 63562599 + Marsupialia Marsupialia No 1
Sha-Mir-12404 None MIR-12404 GGUGAAG None None GL867612.1 601581 601639 + Marsupialia Marsupialia No 1 1
Mdo-Novel-1 mdo-mir-505 MAR-NOVEL-1 UCAACAC MIMAT0028662 MIMAT0028663 6 32562783 32562842 - Marsupialia Marsupialia No
Sha-Novel-1 None MAR-NOVEL-1 UCAACAC None None GL841486.1 154526 154585 - Marsupialia Marsupialia No
Mdo-Novel-2 None MAR-NOVEL-2 AUCACAG None None 6 166795585 166795641 + Marsupialia Marsupialia No 1
Sha-Novel-2 None MAR-NOVEL-2 AUCACAG None None GL841562.1 1562608 1562664 + Marsupialia Marsupialia No 1
Mdo-Novel-3 None MAR-NOVEL-3 UUUCUCC None None 4 243039015 243039072 + Marsupialia Marsupialia No 1
Sha-Novel-3 None MAR-NOVEL-3 UUUCUCC None None GL849664.1 204167 204223 + Marsupialia Marsupialia No 1

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