MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7333

Family name MIR-7333 (all species)
Seed CUGUUGC
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7333
Paralogues
Orthologues Sha-Mir-7333 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
6: 214453341-214453398 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGACAACGUUUGACAGGAGAGUAGAGGCAAUUAUAUUCAGUCAACAGACCCUUUUAUACAUGAGUCUGUUGCCUGAAUAUAGUCACCUCCACACUCCACUUCACAUCGCACCAGAG
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Structure
        10          20        30        40        50        
AUUGACAACGUUUGACA--|   A  A    CA           U        CCUUUU 
                   GGAG GU GAGG  AUUAUAUUCAG CAACAGAC      A
                   CCUC CA CUCC  UGAUAUAAGUC GUUGUCUG      U
GAGACCACGCUACACUUCA^   A  C    AC           C        AGUACA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7333_5p*

mirBase accessionMIMAT0028674
Sequence
0- AAUUAUAUUCAGUCAACAGACC -22
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Proposed targets TargetScanVert: mdo-miR-7333-5p
Mature sequence

Mdo-Mir-7333_3p

mirBase accessionMIMAT0028675
Sequence
36- UCUGUUGCCUGAAUAUAGUCAC -58
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Proposed targets TargetScanVert: mdo-miR-7333-3p