MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7333

Family name MIR-7333 (all species)
Seed CUGUUGC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Mdo-Mir-7333 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL841586.1: 3994610-3994667 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGACGACGGUUGACAGGAGAGUAGAGGCAAUUAUAUUCAGUCAACAGACCCUUUUAUACAUGAGUCUGUUGCCUGAAUAUAGUCACCUCCACACUCCACUUCACAUCGCACCAGAG
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Structure
        10          20        30        40        50        
AUUGACGACGGUUGACA--|   A  A    CA           U        CCUUUU 
                   GGAG GU GAGG  AUUAUAUUCAG CAACAGAC      A
                   CCUC CA CUCC  UGAUAUAAGUC GUUGUCUG      U
GAGACCACGCUACACUUCA^   A  C    AC           C        AGUACA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7333_5p*

mirBase accessionNone
Sequence
0- AAUUAUAUUCAGUCAACAGACC -22
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Mature sequence

Sha-Mir-7333_3p

mirBase accessionNone
Sequence
36- UCUGUUGCCUGAAUAUAGUCAC -58
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