MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7281

Family name MIR-7281 (all species)
Seed AAUAGGC
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7281
Paralogues
Orthologues Sha-Mir-7281 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
2: 37484368-37484427 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCUCAGCUCUCUGCUUGGUGCCUUGUACAUAAUAGGCUCUUAGUAAAUGUGUGUUAAAUUGAACAACCAUUUAUGAAGUGCCUAUUAUGUACAAGUAACCUUUGAAUCAUGUGGCUGGG
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Structure
        10          20        30        40        50          
AGCUCAGCUCUCUGCUU--|  GC                U   A       U UGUUAAA 
                   GGU  CUUGUACAUAAUAGGC CUU GUAAAUG G       \
                   CCA  GAACAUGUAUUAUCCG GAA UAUUUAC C       U
GGGUCGGUGUACUAAGUUU^  AU                U   G       - AACAAGU 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-7281_5p

mirBase accessionMIMAT0028536
Sequence
0- UAAUAGGCUCUUAGUAAAUGUG -22
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Proposed targets TargetScanVert: mdo-miR-7281-5p
Star sequence

Mdo-Mir-7281_3p*

mirBase accessionMIMAT0028537
Sequence
38- CAUUUAUGAAGUGCCUAUUAUG -60
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Proposed targets TargetScanVert: mdo-miR-7281-3p