MirGeneDB 2.1

MirGeneDB ID

Xla-Mir-383-P1

Family name MIR-383 (all species)
Seed GAUCAGA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-383-P2 
Orthologues Mun-Mir-383  Spt-Mir-383 
Node of Origin (locus) X. laevis
Node of Origin (family) Tetrapoda
Genome context
(GCF_001663975.1_XLA_v2)
NC_030724.1: 34120806-34120867 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUACAGGAAACCUCAGUCACUUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUUAGUAGAUAGAAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUUGCCUUUUGCUCCAA
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Structure
        10         20         30        40        50        60 
CAUACAGGAAACCUCAGU-         C-| A      AA    A        UUUAGUAG 
                   CACUUGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUGAACGAG  AG CUGGUC  UCAC GACACCGA        A
AACCUCGUUUUCCGUUCAU         AA^ A      CG    -        CGAAAGAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Eg He Re St St St St
Mature sequence

Xla-Mir-383-P1_5p

mirBase accessionNone
Sequence
0- AGAUCAGAAGGUGAUUGUGGCU -22
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Star sequence

Xla-Mir-383-P1_3p* (predicted)

mirBase accessionNone
Sequence
41- CCACAGCACUGCCUGGUCAGA -62
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