MirGeneDB 2.1

MirGeneDB ID

Spt-Mir-7463

Family name MIR-7463 (all species)
Seed GAGUCUC
Species Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues
Orthologues Ami-Mir-7463  Cli-Mir-7463  Cpi-Mir-7463  Gga-Mir-7463  Tgu-Mir-7463 
Node of Origin (locus) Diapsida
Node of Origin (family) Diapsida
Genome context
(GCA_003113815.1_ASM311381v1_TUATARA)
QEPC01005361.1: 1727542-1727603 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUACCAUGUUAUUAUGGAUAGUAUAGAGUGAGUCUCCUUGAAAGUAAUGGCAUGUGAUUGCUUACCCCAUUACUUUCAAUUGGACUAAGUCUAUGUCAUCCUUAGGGACUCAAUCCCAUU
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Structure
        10          20        30        40        50        60
UAUUACCAUGUUAUUAU--|   AG      GUG     CC             CAUGUGA 
                   GGAU  UAUAGA   AGUCU  UUGAAAGUAAUGG       U
                   CCUA  GUAUCU   UCAGG  AACUUUCAUUACC       U
UUACCCUAACUCAGGGAUU^   CU      GAA     UU             CCAUUCG 
120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Mature sequence

Spt-Mir-7463_5p (predicted)

mirBase accessionNone
Sequence
0- UGAGUCUCCUUGAAAGUAAUGG -22
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Star sequence

Spt-Mir-7463_3p* (predicted)

mirBase accessionNone
Sequence
40- AUUACUUUCAAUUGGACUAAGU -62
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