MirGeneDB ID | Ami-Mir-7463 |
Family name |
MIR-7463 (all species) |
Species |
American alligator (Alligator mississippiensis) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Cli-Mir-7463
Cpi-Mir-7463
Gga-Mir-7463
Spt-Mir-7463
Tgu-Mir-7463
|
Node of Origin (locus) |
Diapsida
|
Node of Origin (family) |
Diapsida
|
Genome context (GCF_000281125.3_ASM28112v4_AMI_add) |
NW_017713592.1: 5259115-5259176 [+]
UCSC
|
Seed |
UUACUUU |
Precursor (pre-Mir +30nt flank) |
UAUUACCAUGUUAUUAUGGAUAGUAUAGACUGAGUCUCCUUGAAAGUAAUGGCAUGUGAUUGCUUACCCCAUUACUUUCAAUGGGACUAAGUCUAUGUCAUCCUUAGGGACUCAAUCCCAUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UAUUACCAUGUUAUUAU--| AG G C CAUGUGA
GGAU UAUAGACU AGUCUC UUGAAAGUAAUGG U
CCUA GUAUCUGA UCAGGG AACUUUCAUUACC U
UUACCCUAACUCAGGGAUU^ CU A U CCAUUCG
120 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Star sequence |
Ami-Mir-7463_5p* (predicted) |
mirBase accession | None |
Sequence |
0- UGAGUCUCCUUGAAAGUAAUGG -22
Get sequence
|
Mature sequence |
Ami-Mir-7463_3p (predicted) |
mirBase accession | None |
Sequence |
40- AUUACUUUCAAUGGGACUAAGU -62
Get sequence
|