MirGeneDB 2.1

MirGeneDB ID

Cpi-Mir-7463

Family name MIR-7463 (all species)
Seed GAGUCUC
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID
Paralogues
Orthologues Ami-Mir-7463  Cli-Mir-7463  Gga-Mir-7463  Spt-Mir-7463  Tgu-Mir-7463 
Node of Origin (locus) Diapsida
Node of Origin (family) Diapsida
Genome context
(chrPic1)
JH584790: 3543468-3543529 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUACCAUGUUAUUAUGGAUAGUAUAGACUGAGUCUCCUUGAAAGUAAUGGCAUGUGAUUGCUUACCCCAUUACUUUCAAUGGGACUAAGUCUAUGUCAUCCUUAGGGACUCAAUCCCAUU
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Structure
        10          20        30        40        50        60
UAUUACCAUGUUAUUAU--|   AG        G      C             CAUGUGA 
                   GGAU  UAUAGACU AGUCUC UUGAAAGUAAUGG       U
                   CCUA  GUAUCUGA UCAGGG AACUUUCAUUACC       U
UUACCCUAACUCAGGGAUU^   CU        A      U             CCAUUCG 
120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
 +
Te Te Te To
Mature sequence

Cpi-Mir-7463_5p

mirBase accessionNone
Sequence
0- UGAGUCUCCUUGAAAGUAAUGG -22
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Co-mature sequence

Cpi-Mir-7463_3p

mirBase accessionNone
Sequence
40- AUUACUUUCAAUGGGACUAAGU -62
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