MirGeneDB 3.0

MirGeneDB ID

Pve-Mir-2722

Family name MIR-2722 (all species)
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues
Orthologues Agr-Mir-2722  Eba-Mir-2722  Esc-Mir-2722  Hru-Mir-2722  Lgi-Mir-2722  Lhy-Mir-2722  Mgi-Mir-2722  Mom-Mir-2722  Npo-Mir-2722  Obi-Mir-2722  Ovu-Mir-2722  Rph-Mir-2722 
Node of Origin (locus) Mollusca
Node of Origin (family) Mollusca
Genome context
(Pve_genome_chr_only)
Pve_Chr10: 853912326-853912383 [-] Ensembl
Seed GAGAUGU
Precursor
(pre-Mir +30nt flank)
GAAGAUAACCUGCAACAUUCACCCUAGUAGAGAGAUGUUUCAUGGGCGCUACACUGCAUUUAAAGUGGCGCCGUGGAAACAUCUUACUGUUAGGGGAGAAGCAAUCAUCAUCUUUUAG
Get precursor sequence
Structure
        10           20        30        40        50        
GAAGAUAACCUGCAACA---|  A         A          AUG        ACUGC 
                    UUC CCCUAGUAG GAGAUGUUUC   GGCGCUAC     A
                    GAG GGGAUUGUC UUCUACAAAG   CCGCGGUG     U
GAUUUUCUACUACUAACGAA^  -         A          GUG        AAAUU 
      110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Pve-Mir-2722_5p

mirBase accessionNone
Sequence
0- AGAGAUGUUUCAUGGGCGCUACA -23
Get sequence
Co-mature sequence

Pve-Mir-2722_3p

mirBase accessionNone
Sequence
35- UGGCGCCGUGGAAACAUCUUACU -58
Get sequence