MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-181-P1o1

Family name MIR-181 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-181a
Paralogues Pma-Mir-181-P1o2  Pma-Mir-181-P2o1  Pma-Mir-181-P2o2 
Orthologues
Node of Origin (locus) P. marinus
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046090.1: 2946536-2946600 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1o1)		 Mir-181-P2o1 NC_046090.1: 2942239-2942311 [-] UCSC Ensembl
Mir-181-P1o1 NC_046090.1: 2946536-2946600 [-] UCSC Ensembl
Seed ACAUUCA
Precursor
(pre-Mir +30nt flank)		 
AGUUGCUUCGCACAAACGGGGGUCUCGAUGAACAUUCAACGCUGUCGGUGAGUUUUGUUCUUCCCGACCUUAAACCAUCGACCGUUGACUGUACCUCGCCACCUGCCACACUCCGCCAAGUCUGA
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Structure
        10          20        30        40        50        60   
AGUUGCUUCGCACAAAC-  -|   CU   UGA   U      CU       A  UUUGUUCUU 
                  GG GGGU  CGA   ACA UCAACG  GUCGGUG GU         C
                  CC UCCA  GCU   UGU AGUUGC  CAGCUAC CA         C
AGUCUGAACCGCCUCACA  G^   CC   CCA   C      --       -  AAUUCCAGC 
   120       110       100        90          80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-181-P1o1_5p
mirBase accessionMIMAT0019486
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Star sequence

Pma-Mir-181-P1o1_3p*
mirBase accessionMIMAT0019487
Sequence 
43- ACCAUCGACCGUUGACUGUACC -65
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