MirGeneDB 2.1
MirGeneDB ID

Pma-Let-7-P2o20

Family name LET-7 (all species)
Seed GAGGUAG
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID
Paralogues Pma-Let-7-P1o1  Pma-Let-7-P2o13  Pma-Let-7-P2o14  Pma-Let-7-P2o15  Pma-Let-7-P2o16  Pma-Let-7-P2o17  Pma-Let-7-P2o18  Pma-Let-7-P2o19 
Orthologues Aae-Let-7  Bge-Let-7  Bpl-Let-7  Cgi-Let-7  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Hme-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Npo-Let-7  Obi-Let-7  Ovu-Let-7  Pfl-Let-7  Pmi-Let-7  Sko-Let-7  Spu-Let-7  Tca-Let-7  Xbo-Let-7 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046116.1: 8596307-8596384 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGAGGAUCAGCACGAACCGCGCCGGCUGGAUGAGGUAGUAGGUUAUAUUGUUUUUCGGCAGUGAUUUUGCCGCGUUUUUGGAGAUAACUCUAUAACCUACUGCCUUCCCGGCCGAGUGGGGAACAGCAGCAUGAGCCC
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Structure
        10         20         30        40        50        60         
CGAGGAUCAGCACGAAC- G   -|      AU                UU   UUUCGGCAGUGAUUUU 
                  C CGC CGGCUGG  GAGGUAGUAGGUUAUA  GUU                \
                  G GUG GCCGGCC  UUCCGUCAUCCAAUAU  CAA                G
CCCGAGUACGACGACAAG G   A^      C-                CU   UAGAGGUUUUUGCGCC 
      130       120       110        100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Let-7-P2o20_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUAUAUUGUU -22
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Star sequence

Pma-Let-7-P2o20_3p* (predicted)
mirBase accessionNone
Sequence 
57- CUCUAUAACCUACUGCCUUCC -78
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