MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-1277

Family name MIR-1277 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1277  Cfa-Mir-1277  Cpo-Mir-1277  Dno-Mir-1277  Eca-Mir-1277  Hsa-Mir-1277  Laf-Mir-1277  Mml-Mir-1277  Mmr-Mir-1277  Ocu-Mir-1277 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 124137078-124137135 [+] UCSC Ensembl
Seed ACGUAGA
Precursor
(pre-Mir +30nt flank)		 
AAAUGCAGUAUCCAUUUCUAACCUCCCAAAUAUAUAUAUAUAUGUACGUAUGUGUAUAUAAAUGUAUACGUAGAUAUAUAUGUAUUUUUGGUGGGUUUAAUUUUUUUCAUCUUUUUUC
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Structure
        10          20        30        40        50        
AAAUGCAGUAUCCAUUUCU--|   UC     U            G        UGUAU 
                     AACC  CCAAA AUAUAUAUAUAU UACGUAUG     A
                     UUGG  GGUUU UAUGUAUAUAUA AUGCAUAU     U
CUUUUUUCUACUUUUUUUAAU^   GU     U            G        GUAAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Br Br Li Li
Star sequence

Pab-Mir-1277_5p*
mirBase accessionNone
Sequence 
0- UAUAUAUAUAUAUGUACGUAUG -22
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Mature sequence

Pab-Mir-1277_3p
mirBase accessionNone
Sequence 
36- UACGUAGAUAUAUAUGUAUUUU -58
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