MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-2387

Family name MIR-2387 (all species)
Seed GGAAGGC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-2387
Paralogues
Orthologues Bta-Mir-2387  Cfa-Mir-2387  Cpo-Mir-2387 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(oryCun2_add)
chrUn0067: 358286-358340 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGCCGGCCAGGCCGGAGCGCGGAGGGCCUGGAAGGCCUGGCUUUGCAGCGUGGACUGAACCCUGCAGACCCGGCCUUGGCGAGCUCUCCCGCUGACGUCCCCACGGCCAAGGA
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Structure
        10           20        30         40        50       
GAGGCCGGCCAGGCCGG---|   C       C  G-      U  C       C  GGA 
                    AGCG GGAGGGC UG  AAGGCC GG UUUGCAG GU   \
                    UCGC CCUCUCG GC  UUCCGG CC AGACGUC CA   C
AGGAACCGGCACCCCUGCAG^   -       A  GG      C  -       C  AGU 
   110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-2387_5p

mirBase accessionMIMAT0048605
Sequence
0- UGGAAGGCCUGGCUUUGCAGCGU -23
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Star sequence

Ocu-Mir-2387_3p*

mirBase accessionMIMAT0048606
Sequence
32- CCUGCAGACCCGGCCUUGGCGAG -55
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