| MirGeneDB ID | Cpo-Mir-2387 |
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| Family name |
MIR-2387 (all species) |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-2387
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| Paralogues |
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| Orthologues |
Bta-Mir-2387
Cfa-Mir-2387
Mmr-Mir-2387
Ocu-Mir-2387
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| Node of Origin (locus) |
Boreoeutheria
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| Node of Origin (family) |
Boreoeutheria
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Genome context
(cavPor3) |
scaffold_234: 708165-708219 [-]
UCSC
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| Seed |
GGAAGGC |
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Precursor
(pre-Mir +30nt flank) |
GAAAGGCGGCCAGGCCAUGGCGUGAGGGCCUGGAAGGCCCAGCUUUGCAGUGUGGACUGCACCCUGCAGACCUGGCCUUAGCAAACUCUCACACUGAUGACCCCGUGGCAGGAGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GAAAGGCGGCCAGGCCAU-- C CC G- C C --| UGG
GG GUGAGGG UG AAGG CCAG UUUGCA GUG \
UC CACUCUC AC UUCC GGUC AGACGU CAC A
CGAGGACGGUGCCCCAGUAG A AA GA - C CC^ GUC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
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| Mature sequence |
Cpo-Mir-2387_5p (predicted) |
| mirBase accession | MIMAT0047431 |
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| Sequence |
0- UGGAAGGCCCAGCUUUGCAGUG -22
Get sequence
|
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| Co-mature sequence |
Cpo-Mir-2387_3p (predicted) |
| mirBase accession | MIMAT0047432 |
|---|
| Sequence |
32- CCUGCAGACCUGGCCUUAGCAAA -55
Get sequence
|
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