MirGeneDB 2.1

MirGeneDB ID

Cpo-Mir-2387

Family name MIR-2387 (all species)
Seed GGAAGGC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-2387
Paralogues
Orthologues Bta-Mir-2387  Cfa-Mir-2387  Ocu-Mir-2387 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(cavPor3)
scaffold_234: 708165-708219 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GAAAGGCGGCCAGGCCAUGGCGUGAGGGCCUGGAAGGCCCAGCUUUGCAGUGUGGACUGCACCCUGCAGACCUGGCCUUAGCAAACUCUCACACUGAUGACCCCGUGGCAGGAGC
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Structure
        10          20        30         40          50      
GAAAGGCGGCCAGGCCAU--  C       CC  G-    C    C      --|  UGG 
                    GG GUGAGGG  UG  AAGG CCAG UUUGCA  GUG   \
                    UC CACUCUC  AC  UUCC GGUC AGACGU  CAC   A
CGAGGACGGUGCCCCAGUAG  A       AA  GA    -    C      CC^  GUC 
   110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Cpo-Mir-2387_5p (predicted)

mirBase accessionMIMAT0047431
Sequence
0- UGGAAGGCCCAGCUUUGCAGUG -22
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Co-mature sequence

Cpo-Mir-2387_3p (predicted)

mirBase accessionMIMAT0047432
Sequence
32- CCUGCAGACCUGGCCUUAGCAAA -55
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